G370457



Basic Information


Item Value
gene id G370457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14369502 ~ 14369738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU421028
ttattattacgtgattaaactactTAATCacgtaactgtaattaactaggaagtcggggcaccaaggaaaatattcagattacaaaagttataattttcctaaaatagctttcagatattttaatatctgatcaccTAGCCTTcgtattaatgaattattctttaccacacgttagtctcattccaaacgtcgtaaattgttggttatctgcacaaacccggtcttcactatgagtc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU421028 True 237 lncRNA 0.33 1 14369502 14369738

Neighbor


gene id symbol gene type direction distance location
LOC110523259 odf2 coding upstream 1962 14351453 ~ 14367540 (+)
LOC110523258 LOC106570496 coding upstream 22090 14345633 ~ 14347412 (+)
mmp11b LOC106570480 coding upstream 60783 14272305 ~ 14308719 (+)
LOC110523253 LOC106570436 coding upstream 140194 14148432 ~ 14231585 (+)
LOC110523252 LOC106570453 coding upstream 227036 14128559 ~ 14142466 (+)
LOC110523261 sptan1 coding downstream 7221 14376959 ~ 14429468 (+)
LOC118964781 NA coding downstream 27072 14396810 ~ 14396945 (+)
uap1l1 uap1l1 coding downstream 68378 14438116 ~ 14447360 (+)
LOC110523268 LOC106570653 coding downstream 175831 14545569 ~ 14547879 (+)
fam102ab LOC106569988 coding downstream 178205 14547943 ~ 14630069 (+)
G370403 NA non-coding upstream 17 14369009 ~ 14369485 (+)
G370455 NA non-coding upstream 18360 14350840 ~ 14351142 (+)
G370428 NA non-coding upstream 23952 14344984 ~ 14345550 (+)
G370454 NA non-coding upstream 25555 14343673 ~ 14343947 (+)
G370453 NA non-coding upstream 25906 14343347 ~ 14343596 (+)
G370458 NA non-coding downstream 257 14369995 ~ 14370231 (+)
G370472 NA non-coding downstream 32101 14401839 ~ 14402147 (+)
G370407 wdr34 non-coding downstream 61109 14430847 ~ 14431069 (+)
G370476 NA non-coding downstream 62289 14432027 ~ 14432389 (+)
G370406 wdr34 non-coding downstream 62911 14432649 ~ 14432907 (+)
G370414 NA other upstream 1341 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 43607 14321104 ~ 14325895 (+)
G370360 NA other upstream 110369 14255803 ~ 14259133 (+)
G369763 NA other upstream 600206 13765247 ~ 13769296 (+)
G368440 NA other upstream 1260368 13108696 ~ 13109134 (+)
LOC118964542 LOC106569496 other downstream 434923 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 678440 15047739 ~ 15054353 (+)
G371182 NA other downstream 754552 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1421821 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1849868 16218328 ~ 16220933 (+)

Expression



Co-expression Network