Gene
RNA
| Item | Value |
|---|---|
| gene id | G370476 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14432027 ~ 14432389 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| WD repeat-containing protein 34 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421047 | True | 363 | lncRNA | 0.50 | 1 | 14432027 | 14432389 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523261 | sptan1 | coding | upstream | 2559 | 14376959 ~ 14429468 (+) |
| LOC118964781 | NA | coding | upstream | 35082 | 14396810 ~ 14396945 (+) |
| LOC110523259 | odf2 | coding | upstream | 64487 | 14351453 ~ 14367540 (+) |
| LOC110523258 | LOC106570496 | coding | upstream | 84615 | 14345633 ~ 14347412 (+) |
| mmp11b | LOC106570480 | coding | upstream | 123308 | 14272305 ~ 14308719 (+) |
| uap1l1 | uap1l1 | coding | downstream | 5727 | 14438116 ~ 14447360 (+) |
| LOC110523268 | LOC106570653 | coding | downstream | 113180 | 14545569 ~ 14547879 (+) |
| fam102ab | LOC106569988 | coding | downstream | 115554 | 14547943 ~ 14630069 (+) |
| LOC110523269 | LOC106569993 | coding | downstream | 210384 | 14642773 ~ 14672009 (+) |
| dpm2 | NA | coding | downstream | 245731 | 14678120 ~ 14684431 (+) |
| G370407 | wdr34 | non-coding | upstream | 958 | 14430847 ~ 14431069 (+) |
| G370472 | NA | non-coding | upstream | 29880 | 14401839 ~ 14402147 (+) |
| G370458 | NA | non-coding | upstream | 61796 | 14369995 ~ 14370231 (+) |
| G370457 | NA | non-coding | upstream | 62289 | 14369502 ~ 14369738 (+) |
| G370403 | NA | non-coding | upstream | 62542 | 14369009 ~ 14369485 (+) |
| G370406 | wdr34 | non-coding | downstream | 260 | 14432649 ~ 14432907 (+) |
| G370413 | NA | non-coding | downstream | 1043 | 14433432 ~ 14433707 (+) |
| G370402 | LOC101064074 | non-coding | downstream | 1860 | 14434249 ~ 14437006 (+) |
| G370516 | NA | non-coding | downstream | 93894 | 14526283 ~ 14526559 (+) |
| G370520 | NA | non-coding | downstream | 96875 | 14529264 ~ 14529588 (+) |
| G370414 | NA | other | upstream | 63866 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 106132 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 172894 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 662731 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 1322893 | 13108696 ~ 13109134 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 372272 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 615789 | 15047739 ~ 15054353 (+) |
| G371182 | NA | other | downstream | 691901 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 1359170 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 1787217 | 16218328 ~ 16220933 (+) |
