G370520



Basic Information


Item Value
gene id G370520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14529264 ~ 14529588 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU421092
gcacaaggtgcatctgtgtaatgatcatgctgtttaatcagcttcttgatatgccagacctgtcaggtggatggattatattggcaaagaagaaatgctcactaacagggatgtaaacaaatgtgtgcagagtatggaacatttctgtgatcttttatttcagctcatgaaaccaacacttcacatttatgttcagtataaatatgacatttagcagacgcctttatccaaagtgacttacagtcatgtgtgcatacattctTTTTAAGTATGGGTGGCCCCAGGAATCGAACCCTCAACCCTGATggtgcaagcgccatgctct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU421092 True 325 lncRNA 0.41 1 14529264 14529588

Neighbor


gene id symbol gene type direction distance location
uap1l1 uap1l1 coding upstream 81904 14438116 ~ 14447360 (+)
LOC110523261 sptan1 coding upstream 99796 14376959 ~ 14429468 (+)
LOC118964781 NA coding upstream 132319 14396810 ~ 14396945 (+)
LOC110523259 odf2 coding upstream 161724 14351453 ~ 14367540 (+)
LOC110523258 LOC106570496 coding upstream 181852 14345633 ~ 14347412 (+)
LOC110523268 LOC106570653 coding downstream 15981 14545569 ~ 14547879 (+)
fam102ab LOC106569988 coding downstream 18355 14547943 ~ 14630069 (+)
LOC110523269 LOC106569993 coding downstream 113185 14642773 ~ 14672009 (+)
dpm2 NA coding downstream 148532 14678120 ~ 14684431 (+)
pip5kl1 LOC106570018 coding downstream 155006 14684594 ~ 14693573 (+)
G370516 NA non-coding upstream 2705 14526283 ~ 14526559 (+)
G370402 LOC101064074 non-coding upstream 92258 14434249 ~ 14437006 (+)
G370413 NA non-coding upstream 95557 14433432 ~ 14433707 (+)
G370406 wdr34 non-coding upstream 96357 14432649 ~ 14432907 (+)
G370476 NA non-coding upstream 96875 14432027 ~ 14432389 (+)
G370522 NA non-coding downstream 985 14530573 ~ 14530923 (+)
G370524 NA non-coding downstream 3377 14532965 ~ 14534995 (+)
G370575 NA non-coding downstream 111932 14641520 ~ 14641856 (+)
G370414 NA other upstream 161103 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 203369 14321104 ~ 14325895 (+)
G370360 NA other upstream 270131 14255803 ~ 14259133 (+)
G369763 NA other upstream 759968 13765247 ~ 13769296 (+)
G368440 NA other upstream 1420130 13108696 ~ 13109134 (+)
LOC118964542 LOC106569496 other downstream 275073 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 518590 15047739 ~ 15054353 (+)
G371182 NA other downstream 594702 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1261971 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1690018 16218328 ~ 16220933 (+)

Expression



Co-expression Network