Gene
RNA
| Item | Value |
|---|---|
| gene id | G370762 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14587017 ~ 14588624 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421349 | True | 605 | lncRNA | 0.43 | 3 | 14587017 | 14588624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc25a25b | LOC106570619 | coding | downstream | 51895 | 14487750 ~ 14535122 (-) |
| pkn3 | pkn3 | coding | downstream | 106597 | 14460818 ~ 14480420 (-) |
| LOC110523265 | LOC106570595 | coding | downstream | 148522 | 14434246 ~ 14438495 (-) |
| dync2i2 | wdr34 | coding | downstream | 153251 | 14429469 ~ 14433766 (-) |
| LOC110523260 | NA | coding | downstream | 236736 | 14346815 ~ 14350281 (-) |
| LOC110523275 | NA | coding | upstream | 177552 | 14766176 ~ 14769160 (-) |
| nup188 | nup188 | coding | upstream | 303355 | 14891979 ~ 14911591 (-) |
| phyhd1 | phyhd1 | coding | upstream | 326241 | 14914865 ~ 14925540 (-) |
| LOC110523281 | lrrc8a | coding | upstream | 342244 | 14930868 ~ 14959152 (-) |
| LOC110523283 | LOC106569957 | coding | upstream | 384625 | 14973249 ~ 14986191 (-) |
| G370729 | LOC106570653 | non-coding | downstream | 39148 | 14546884 ~ 14547869 (-) |
| G370713 | NA | non-coding | downstream | 57461 | 14529104 ~ 14529556 (-) |
| G370710 | NA | non-coding | downstream | 60579 | 14526144 ~ 14526438 (-) |
| G370629 | NA | non-coding | downstream | 166762 | 14413810 ~ 14420255 (-) |
| G370631 | LOC102778734 | non-coding | downstream | 176970 | 14409094 ~ 14410047 (-) |
| G370761 | NA | non-coding | upstream | 40477 | 14629101 ~ 14630064 (-) |
| G370814 | NA | non-coding | upstream | 96124 | 14684748 ~ 14686976 (-) |
| G370815 | NA | non-coding | upstream | 99464 | 14688088 ~ 14688384 (-) |
| G370817 | NA | non-coding | upstream | 101103 | 14689727 ~ 14689951 (-) |
| G370819 | NA | non-coding | upstream | 102646 | 14691270 ~ 14691881 (-) |
| G370635 | NA | other | downstream | 158426 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 378312 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 1880925 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 2450227 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 5396919 | 9189669 ~ 9190098 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 404504 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 534851 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 1107468 | 15693396 ~ 15707607 (-) |
| G372122 | NA | other | upstream | 1386982 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 1389878 | 15978502 ~ 15981215 (-) |
