G370575


Basic Information

Item Value
gene id G370575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14641520 ~ 14641856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421151
ATTGATGTGGAGAGCATTTATGTAAAGTTACAACTTTGAGGTTTCAAGCAAGGAAAATTATACCTAGTGAGAAAATCTTTACTTCAGAATAATGCTTATTTTGGAACATCTCCTATTGTAAGTGATATCCAGGTGAATGGCATAGGTTTACTAGATAAGAAATTCAACAATCGTTTAGTAAGGGATATTTTCTACAGACATTCTATTCCTTCTGCTATATTTTTTTGGGCATCATCGTTTGATGTAAACTGGCGCCGTGCTTGGCTCACTCCACACACATTTATGGTGACCAATAAAGTAAAGGAGATCTCCTTTAAGATTATCCATAGATTATACT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107372402

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421151 True 337 lncRNA 0.34 1 14641520 14641856

Neighbor

gene id symbol gene type direction distance location
fam102ab LOC106569988 coding upstream 11451 14547943 ~ 14630069 (+)
LOC110523268 LOC106570653 coding upstream 93641 14545569 ~ 14547879 (+)
uap1l1 uap1l1 coding upstream 194160 14438116 ~ 14447360 (+)
LOC110523261 sptan1 coding upstream 212052 14376959 ~ 14429468 (+)
LOC118964781 NA coding upstream 244575 14396810 ~ 14396945 (+)
LOC110523269 LOC106569993 coding downstream 917 14642773 ~ 14672009 (+)
dpm2 NA coding downstream 36264 14678120 ~ 14684431 (+)
pip5kl1 LOC106570018 coding downstream 42738 14684594 ~ 14693573 (+)
sh3glb2b sh3glb2 coding downstream 64939 14706795 ~ 14759767 (+)
LOC110523276 NA coding downstream 143615 14785471 ~ 14793184 (+)
G370524 NA non-coding upstream 106525 14532965 ~ 14534995 (+)
G370522 NA non-coding upstream 110597 14530573 ~ 14530923 (+)
G370520 NA non-coding upstream 111932 14529264 ~ 14529588 (+)
G370516 NA non-coding upstream 114961 14526283 ~ 14526559 (+)
G370539 NA non-coding downstream 34256 14676112 ~ 14677187 (+)
G370537 NA non-coding downstream 53294 14695150 ~ 14695702 (+)
G370867 NA non-coding downstream 94155 14736011 ~ 14749996 (+)
G370414 NA other upstream 273359 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 315625 14321104 ~ 14325895 (+)
G370360 NA other upstream 382387 14255803 ~ 14259133 (+)
G369763 NA other upstream 872224 13765247 ~ 13769296 (+)
G368440 NA other upstream 1532386 13108696 ~ 13109134 (+)
LOC118964542 LOC106569496 other downstream 162805 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 406322 15047739 ~ 15054353 (+)
G371182 NA other downstream 482434 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1149703 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1577750 16218328 ~ 16220933 (+)

Expression


Co-expression Network