Gene
RNA
| Item | Value |
|---|---|
| gene id | G370998 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14762390 ~ 14762613 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421637 | True | 224 | lncRNA | 0.40 | 1 | 14762390 | 14762613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc25a25b | LOC106570619 | coding | downstream | 227268 | 14487750 ~ 14535122 (-) |
| pkn3 | pkn3 | coding | downstream | 281970 | 14460818 ~ 14480420 (-) |
| LOC110523265 | LOC106570595 | coding | downstream | 323895 | 14434246 ~ 14438495 (-) |
| dync2i2 | wdr34 | coding | downstream | 328624 | 14429469 ~ 14433766 (-) |
| LOC110523260 | NA | coding | downstream | 412109 | 14346815 ~ 14350281 (-) |
| LOC110523275 | NA | coding | upstream | 3563 | 14766176 ~ 14769160 (-) |
| nup188 | nup188 | coding | upstream | 129366 | 14891979 ~ 14911591 (-) |
| phyhd1 | phyhd1 | coding | upstream | 152252 | 14914865 ~ 14925540 (-) |
| LOC110523281 | lrrc8a | coding | upstream | 168255 | 14930868 ~ 14959152 (-) |
| LOC110523283 | LOC106569957 | coding | upstream | 210636 | 14973249 ~ 14986191 (-) |
| G370997 | NA | non-coding | downstream | 233 | 14761860 ~ 14762157 (-) |
| G370822 | NA | non-coding | downstream | 65129 | 14697025 ~ 14697261 (-) |
| G370819 | NA | non-coding | downstream | 70509 | 14691270 ~ 14691881 (-) |
| G370817 | NA | non-coding | downstream | 72439 | 14689727 ~ 14689951 (-) |
| G370815 | NA | non-coding | downstream | 74006 | 14688088 ~ 14688384 (-) |
| G371005 | NA | non-coding | upstream | 8625 | 14771238 ~ 14771467 (-) |
| G371007 | NA | non-coding | upstream | 9885 | 14772498 ~ 14772814 (-) |
| G371012 | NA | non-coding | upstream | 16021 | 14778634 ~ 14778981 (-) |
| G371013 | NA | non-coding | upstream | 16396 | 14779009 ~ 14779278 (-) |
| G371020 | NA | non-coding | upstream | 27697 | 14790310 ~ 14790915 (-) |
| G370635 | NA | other | downstream | 333799 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 553685 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 2056298 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 2625600 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 5572292 | 9189669 ~ 9190098 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 230515 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 360862 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 933479 | 15693396 ~ 15707607 (-) |
| G372122 | NA | other | upstream | 1212993 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 1215889 | 15978502 ~ 15981215 (-) |
