G370882


Basic Information

Item Value
gene id G370882
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14763551 ~ 14763750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421499
gatagatacagtggggagaaatactatttgatacactgccgatttttcaggtttccctacttacaatgcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacataagta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421499 True 200 lncRNA 0.32 1 14763551 14763750

Neighbor

gene id symbol gene type direction distance location
sh3glb2b sh3glb2 coding upstream 3784 14706795 ~ 14759767 (+)
pip5kl1 LOC106570018 coding upstream 69978 14684594 ~ 14693573 (+)
dpm2 NA coding upstream 79120 14678120 ~ 14684431 (+)
LOC110523269 LOC106569993 coding upstream 91542 14642773 ~ 14672009 (+)
fam102ab LOC106569988 coding upstream 133482 14547943 ~ 14630069 (+)
LOC110523276 NA coding downstream 21721 14785471 ~ 14793184 (+)
LOC118964542 LOC106569496 coding downstream 35022 14798616 ~ 14805526 (+)
cdk5rap2 LOC106570081 coding downstream 55559 14819309 ~ 14892194 (+)
dolk dolk coding downstream 148765 14901565 ~ 14916678 (+)
dnlz dnlz coding downstream 231498 14995248 ~ 14999436 (+)
G370867 NA non-coding upstream 13555 14736011 ~ 14749996 (+)
G370537 NA non-coding upstream 67849 14695150 ~ 14695702 (+)
G370539 NA non-coding upstream 86364 14676112 ~ 14677187 (+)
G370883 NA non-coding downstream 448 14764198 ~ 14764544 (+)
G370886 NA non-coding downstream 7287 14771037 ~ 14771236 (+)
G370888 NA non-coding downstream 9675 14773425 ~ 14773709 (+)
G370889 NA non-coding downstream 14243 14777993 ~ 14778218 (+)
G370890 NA non-coding downstream 14495 14778245 ~ 14778469 (+)
G370414 NA other upstream 395390 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 437656 14321104 ~ 14325895 (+)
G370360 NA other upstream 504418 14255803 ~ 14259133 (+)
G369763 NA other upstream 994255 13765247 ~ 13769296 (+)
G368440 NA other upstream 1654417 13108696 ~ 13109134 (+)
LOC110519479 LOC106596183 other downstream 284428 15047739 ~ 15054353 (+)
G371182 NA other downstream 360540 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1027809 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1455856 16218328 ~ 16220933 (+)

Expression


Co-expression Network