G370953


Basic Information

Item Value
gene id G370953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14948532 ~ 14948785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421581
gaggtaactctaggtcttcctttcctgtggcagttctcatgagagccagtttcatcatagcgattgaaggtttttgcgactacacttaAAAAGAAGCTTTCGAAAGTTCttaattttccggattgactgaccttcatgtcttaaagtaatgatggactgttgcttCTCTgttaatttgagctgttcttgccataatatggacttggtcttttagcaaatagggctagcttctgtatacccccctaccttgtcac

Function

NR:

description
hypothetical protein EH28_21996

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU421581 True 254 lncRNA 0.41 1 14948532 14948785

Neighbor

gene id symbol gene type direction distance location
dolk dolk coding upstream 31854 14901565 ~ 14916678 (+)
cdk5rap2 LOC106570081 coding upstream 56338 14819309 ~ 14892194 (+)
LOC118964542 LOC106569496 coding upstream 143006 14798616 ~ 14805526 (+)
LOC110523276 NA coding upstream 155983 14785471 ~ 14793184 (+)
sh3glb2b sh3glb2 coding upstream 188765 14706795 ~ 14759767 (+)
dnlz dnlz coding downstream 46463 14995248 ~ 14999436 (+)
LOC110518391 LOC106596183 coding downstream 59005 15007790 ~ 15014612 (+)
LOC110523290 LOC106596183 coding downstream 79018 15027803 ~ 15034589 (+)
LOC110519479 LOC106596183 coding downstream 98954 15047739 ~ 15054353 (+)
LOC110518158 LOC106596183 coding downstream 116842 15065627 ~ 15075700 (+)
G370951 NA non-coding upstream 1364 14946899 ~ 14947168 (+)
G370948 NA non-coding upstream 5617 14942691 ~ 14942915 (+)
G370852 NA non-coding upstream 8184 14939972 ~ 14940348 (+)
G370844 lrrc8a non-coding upstream 17073 14930918 ~ 14931459 (+)
G370841 NA non-coding upstream 17706 14925971 ~ 14930826 (+)
G370959 NA non-coding downstream 9067 14957852 ~ 14958072 (+)
G370961 NA non-coding downstream 9726 14958511 ~ 14958742 (+)
G371094 NA non-coding downstream 10453 14959238 ~ 14959495 (+)
G371101 NA non-coding downstream 13847 14962632 ~ 14962931 (+)
G371111 NA non-coding downstream 22696 14971481 ~ 14971790 (+)
G370414 NA other upstream 580371 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 622637 14321104 ~ 14325895 (+)
G370360 NA other upstream 689399 14255803 ~ 14259133 (+)
G369763 NA other upstream 1179236 13765247 ~ 13769296 (+)
G371182 NA other downstream 175505 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 842774 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1270821 16218328 ~ 16220933 (+)
G372373 NA other downstream 1786857 16735642 ~ 16738500 (+)

Expression


Co-expression Network