G371111


Basic Information

Item Value
gene id G371111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14971481 ~ 14971790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421767
gctaaccgatcgctgcagctgtacatagtctatcagtAAATAGCCCGCCcctttttacctacctcatccccatactgtttttatttatttacttttctgctattttgcacaccagtatctctacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctccttatgccttttgcacacaatgtatatagactatcctttttttctactatgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421767 True 310 lncRNA 0.37 1 14971481 14971790

Neighbor

gene id symbol gene type direction distance location
dolk dolk coding upstream 54803 14901565 ~ 14916678 (+)
cdk5rap2 LOC106570081 coding upstream 79287 14819309 ~ 14892194 (+)
LOC118964542 LOC106569496 coding upstream 165955 14798616 ~ 14805526 (+)
LOC110523276 NA coding upstream 178932 14785471 ~ 14793184 (+)
sh3glb2b sh3glb2 coding upstream 211714 14706795 ~ 14759767 (+)
dnlz dnlz coding downstream 23458 14995248 ~ 14999436 (+)
LOC110518391 LOC106596183 coding downstream 36000 15007790 ~ 15014612 (+)
LOC110523290 LOC106596183 coding downstream 56013 15027803 ~ 15034589 (+)
LOC110519479 LOC106596183 coding downstream 75949 15047739 ~ 15054353 (+)
LOC110518158 LOC106596183 coding downstream 93837 15065627 ~ 15075700 (+)
G371101 NA non-coding upstream 8550 14962632 ~ 14962931 (+)
G371094 NA non-coding upstream 11986 14959238 ~ 14959495 (+)
G370961 NA non-coding upstream 12739 14958511 ~ 14958742 (+)
G370959 NA non-coding upstream 13409 14957852 ~ 14958072 (+)
G370953 NA non-coding upstream 22696 14948532 ~ 14948785 (+)
G371113 NA non-coding downstream 939 14972729 ~ 14973074 (+)
G371158 NA non-coding downstream 39026 15010816 ~ 15050936 (+)
G371159 NA non-coding downstream 44031 15015821 ~ 15056218 (+)
G371170 NA non-coding downstream 95235 15067025 ~ 15088540 (+)
G370414 NA other upstream 603320 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 645586 14321104 ~ 14325895 (+)
G370360 NA other upstream 712348 14255803 ~ 14259133 (+)
G369763 NA other upstream 1202185 13765247 ~ 13769296 (+)
G371182 NA other downstream 152500 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 819769 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1247816 16218328 ~ 16220933 (+)
G372373 NA other downstream 1763852 16735642 ~ 16738500 (+)

Expression


Co-expression Network