Gene
RNA
| Item | Value |
|---|---|
| gene id | G371258 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14991579 ~ 14991938 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421936 | True | 360 | lncRNA | 0.38 | 1 | 14991579 | 14991938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523283 | LOC106569957 | coding | downstream | 5388 | 14973249 ~ 14986191 (-) |
| LOC110523281 | lrrc8a | coding | downstream | 32427 | 14930868 ~ 14959152 (-) |
| phyhd1 | phyhd1 | coding | downstream | 66039 | 14914865 ~ 14925540 (-) |
| nup188 | nup188 | coding | downstream | 79988 | 14891979 ~ 14911591 (-) |
| LOC110523275 | NA | coding | downstream | 222419 | 14766176 ~ 14769160 (-) |
| LOC110523296 | LOC106569911 | coding | upstream | 24818 | 15016756 ~ 15023815 (-) |
| LOC110516435 | LOC106569911 | coding | upstream | 44657 | 15036595 ~ 15043478 (-) |
| LOC110519481 | LOC106569911 | coding | upstream | 64442 | 15056380 ~ 15061384 (-) |
| LOC110523297 | LOC106569911 | coding | upstream | 86861 | 15078799 ~ 15082588 (-) |
| LOC110523286 | LOC106569911 | coding | upstream | 106847 | 15098785 ~ 15117065 (-) |
| G371251 | NA | non-coding | downstream | 120 | 14976320 ~ 14991459 (-) |
| G371110 | NA | non-coding | downstream | 20748 | 14970576 ~ 14970831 (-) |
| G371109 | NA | non-coding | downstream | 23429 | 14967822 ~ 14968150 (-) |
| G371108 | NA | non-coding | downstream | 25140 | 14966135 ~ 14966439 (-) |
| G371043 | NA | non-coding | downstream | 62324 | 14925970 ~ 14929255 (-) |
| LOC110511258 | dnlz | non-coding | upstream | 4640 | 14996578 ~ 15121731 (-) |
| G371268 | NA | non-coding | upstream | 16698 | 15008636 ~ 15049151 (-) |
| G371272 | NA | non-coding | upstream | 39862 | 15031800 ~ 15051963 (-) |
| G371274 | NA | non-coding | upstream | 41777 | 15033715 ~ 15053918 (-) |
| G371276 | NA | non-coding | upstream | 50266 | 15042204 ~ 15042688 (-) |
| G370635 | NA | other | downstream | 562988 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 782874 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 2285487 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 2854789 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 5801481 | 9189669 ~ 9190098 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 1190 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 131537 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 704154 | 15693396 ~ 15707607 (-) |
| G372122 | NA | other | upstream | 983668 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 986564 | 15978502 ~ 15981215 (-) |
