G371159


Basic Information

Item Value
gene id G371159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15015821 ~ 15056218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421817
gcacagtcACCTTactgtaagtaaacttctgacccactgcaattgtgatacagtgaaataatctgttagaaacatttgttggaaatacttgtgtcatgcacacagatgtcctaaccgacttgccaaaactatcgtttgttaacaagaaatttgtggagtggttgaaaaacgagttttattgactccaacctaagtgtatataaacttacgacttcaactgtacatagttgtacagaggcccattatcagcaatataactcctgtgttccaatggcacgttgttagctaattcaaatgtataattttaaaaggctaattgatcattagaaaatccttttgcaattacgttagcacagctgaaaactgttctgattaaagaagcaataaaactggcctttagactagttgggtatctggagcatcagcatttgtgggttcgtttacaggctcaaaatggccagaaacaaataacttttttcTAAAAACTCGTCAGCCTATTCtagttctgagaaattaaggctattctgtgcgagaaattgccaagaaactgaagatctcgtactactccacagaacagtgcaaactggcaataaccagaatagaaagagggggtggccctggtgcacaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421817 True 629 lncRNA 0.38 3 15015821 15056218

Neighbor

gene id symbol gene type direction distance location
LOC110518391 LOC106596183 coding upstream 1209 15007790 ~ 15014612 (+)
dnlz dnlz coding upstream 16385 14995248 ~ 14999436 (+)
dolk dolk coding upstream 99143 14901565 ~ 14916678 (+)
cdk5rap2 LOC106570081 coding upstream 123627 14819309 ~ 14892194 (+)
LOC118964542 LOC106569496 coding upstream 210295 14798616 ~ 14805526 (+)
LOC110518158 LOC106596183 coding downstream 9409 15065627 ~ 15075700 (+)
LOC110519478 LOC106596183 coding downstream 30660 15086878 ~ 15096757 (+)
uck1 LOC106569943 coding downstream 61006 15117198 ~ 15187954 (+)
LOC110523300 LOC105028392 coding downstream 408337 15464555 ~ 15591443 (+)
st6galnac4 st6galnac4 coding downstream 693973 15750191 ~ 15756190 (+)
G371113 NA non-coding upstream 42747 14972729 ~ 14973074 (+)
G371111 NA non-coding upstream 44031 14971481 ~ 14971790 (+)
G371101 NA non-coding upstream 52890 14962632 ~ 14962931 (+)
G371094 NA non-coding upstream 56326 14959238 ~ 14959495 (+)
G370961 NA non-coding upstream 57079 14958511 ~ 14958742 (+)
G371170 NA non-coding downstream 10807 15067025 ~ 15088540 (+)
G371171 NA non-coding downstream 21489 15077707 ~ 15100378 (+)
G371172 LOC106569911 non-coding downstream 24474 15080692 ~ 15102326 (+)
G371139 NA non-coding downstream 34749 15090967 ~ 15150407 (+)
G370414 NA other upstream 647660 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 689926 14321104 ~ 14325895 (+)
G370360 NA other upstream 756688 14255803 ~ 14259133 (+)
G369763 NA other upstream 1246525 13765247 ~ 13769296 (+)
G371182 NA other downstream 68072 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 735341 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1163388 16218328 ~ 16220933 (+)
G372373 NA other downstream 1679424 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1814216 16870434 ~ 16882185 (+)

Expression


Co-expression Network