Gene
RNA
| Item | Value |
|---|---|
| gene id | G371274 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15033715 ~ 15053918 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| high choriolytic enzyme 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421962 | True | 445 | lncRNA | 0.43 | 2 | 15033715 | 15053918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523296 | LOC106569911 | coding | downstream | 9900 | 15016756 ~ 15023815 (-) |
| LOC110524957 | LOC106569957 | coding | downstream | 38518 | 14988147 ~ 14995197 (-) |
| LOC110523283 | LOC106569957 | coding | downstream | 47524 | 14973249 ~ 14986191 (-) |
| LOC110523281 | lrrc8a | coding | downstream | 74563 | 14930868 ~ 14959152 (-) |
| phyhd1 | phyhd1 | coding | downstream | 108175 | 14914865 ~ 14925540 (-) |
| LOC110519481 | LOC106569911 | coding | upstream | 2462 | 15056380 ~ 15061384 (-) |
| LOC110523297 | LOC106569911 | coding | upstream | 24881 | 15078799 ~ 15082588 (-) |
| LOC110523286 | LOC106569911 | coding | upstream | 44867 | 15098785 ~ 15117065 (-) |
| LOC110511258 | dnlz | coding | upstream | 66436 | 14996578 ~ 15121731 (-) |
| LOC118964741 | LOC106569911 | coding | upstream | 71844 | 15125762 ~ 15127293 (-) |
| G371258 | NA | non-coding | downstream | 41777 | 14991579 ~ 14991938 (-) |
| G371251 | NA | non-coding | downstream | 42256 | 14976320 ~ 14991459 (-) |
| G371110 | NA | non-coding | downstream | 62884 | 14970576 ~ 14970831 (-) |
| G371109 | NA | non-coding | downstream | 65565 | 14967822 ~ 14968150 (-) |
| G371108 | NA | non-coding | downstream | 67276 | 14966135 ~ 14966439 (-) |
| LOC118936652 | LOC106569911 | non-coding | upstream | 27912 | 15081830 ~ 15136742 (-) |
| G371289 | NA | non-coding | upstream | 48417 | 15102335 ~ 15102656 (-) |
| G371286 | NA | non-coding | upstream | 65886 | 15119804 ~ 15140073 (-) |
| LOC118936653 | LOC106569911 | non-coding | upstream | 70185 | 15124103 ~ 15129366 (-) |
| LOC110523287 | LOC106569911 | non-coding | upstream | 82917 | 15135601 ~ 15138027 (-) |
| G370635 | NA | other | downstream | 605124 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 825010 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 2327623 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 2896925 | 12134052 ~ 12136790 (-) |
| G371294 | LOC106569911 | other | upstream | 69557 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 642174 | 15693396 ~ 15707607 (-) |
| G372122 | NA | other | upstream | 921688 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 924584 | 15978502 ~ 15981215 (-) |
| LOC110523341 | LOC106569324 | other | upstream | 1880317 | 16909582 ~ 16942359 (-) |
