G371171


Basic Information

Item Value
gene id G371171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15077707 ~ 15100378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421835
AACAGAAGAGGCTGATGCTTACAATTCATTTTTATTGTAAAGTTGTATGATATAAAGCAGAAAGAATTAACATCCAAAGGCCCATTTAGGGCCATGGCAAACTGCCTATCATagaccctctccctcttcctccatggTGTCCTCCAGAAGCTCATGAAAGCAATGCTGTCAATCCACATGGAAGCAGAACATAGAGTGCTCCTGTAAAACAATTATTCCGTCAGGAATTAATCAAACAGTCATTGAACGAATGGGATTCACAGTAATACAATTTGTCTGAGAAATGTCAATCATGAACCCCAGTTGTGGAGCCCCTATCCTCTCATCACAAGCCCAAGCACTTACCTCACCTGCTCTTCTGTGTTTTCCtcttcctgcctccctccctttcatCCTTTCCTATTGATGCTTCAACAGATAAAGAGACCTCATATGCCACAATCTGTTTCGGGAAAAAACATCTGAAAGCCCACTCACTTGAGGTGAATAATCACATGAGATCAGGAATTGTAGTGGTTGGGTTGAAAGACATTACCTAAACATACTTCTATCAACACTAATACAGTTGTCTACAGAGAACAGGCTTTGATAGTAAACACTTACCTAATGAAGTCATCCAGCTGtgctcctcctccaaccctcccaTCCTTTCCAATTGATGCTTCAACAGATATGTTTCTTTGGCTGCTCTTTTCATCTATCTCAGACTTGAACAGGCTTAGAAAGAGGACAAAAGGAAGCCAAAGCAACTTTAAAAGAGAAGTAGAAGAGGCAGACTTCTTTTCTTTTTGACGTCTGTTGGCTATTTTTCCTGTGCTCTTGGTCTTCTCCTTTTCTGCTAATCCTTAGTTATTTAAATAGTTATTTTGGCCATATGTCCATCAGAATTCTAGTTCAATCTCCTCTCTATTACTCTTCTAAAGTGTTTTCACCTCTTTTCTCTGGGTCTCTGTTTATCTTGCCTCCCCCTTGTGTTTTCCATAACTTTCTTTCGATCCACTCAGCTCTTCTTTACTGCTAATCTCATTTACCTTTTATCCCATGGTCCTTCCTGATTCTGTCCATCAGAACTTGAATTCTATATCTCCTACTTCCCTCCTGATAAACCACTCtggtctctcttcctcctctctcatgtttcctcctcttcaccctcatgCCTGGCTTCCTTATAATTTGTTCCTCCTTTTActtattttctcatttttttgtttgttttttctcttAAAAAAACTATTGTTTATTTACATCTATCAACATACCTAGGAGCATTGACTTGTACATTTCTTCTTTTGTCTGCTCCCTTTCTTTTGTCATCTACTGAAAAGTTGTCGATGCCTCGTCCGCCGCTTTCTTCTGCTTCTTCCTTGTTCTCCTCTTTGCAGACTGTGCGTGAGCGGTCTCTGGacgctgctctctctcttccctccgcACAGAGGCGTCAGATGTAGACGCTGTGACCTCGTATGCCAC

Function

NR:

description
uncharacterized protein KIAA1211 homolog

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU421835 True 1473 lncRNA 0.41 2 15077707 15100378

Neighbor

gene id symbol gene type direction distance location
LOC110518158 LOC106596183 coding upstream 2149 15065627 ~ 15075700 (+)
LOC110519479 LOC106596183 coding upstream 23354 15047739 ~ 15054353 (+)
LOC110523290 LOC106596183 coding upstream 43118 15027803 ~ 15034589 (+)
LOC110518391 LOC106596183 coding upstream 63095 15007790 ~ 15014612 (+)
dnlz dnlz coding upstream 78271 14995248 ~ 14999436 (+)
uck1 LOC106569943 coding downstream 16846 15117198 ~ 15187954 (+)
LOC110523300 LOC105028392 coding downstream 364177 15464555 ~ 15591443 (+)
st6galnac4 st6galnac4 coding downstream 649813 15750191 ~ 15756190 (+)
st6galnac6 sia7f coding downstream 655881 15756259 ~ 15772026 (+)
LOC110523312 surf1 coding downstream 688417 15788795 ~ 15791028 (+)
G371159 NA non-coding upstream 21489 15015821 ~ 15056218 (+)
G371158 NA non-coding upstream 26771 15010816 ~ 15050936 (+)
G371113 NA non-coding upstream 104633 14972729 ~ 14973074 (+)
G371111 NA non-coding upstream 105917 14971481 ~ 14971790 (+)
G371206 NA non-coding downstream 92571 15192949 ~ 15193278 (+)
G371367 NA non-coding downstream 155724 15256102 ~ 15256318 (+)
G371420 NA non-coding downstream 246750 15347128 ~ 15347847 (+)
G371452 NA non-coding downstream 318115 15418493 ~ 15418732 (+)
LOC118964542 LOC106569496 other upstream 272236 14798616 ~ 14805526 (+)
G370414 NA other upstream 709546 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 751812 14321104 ~ 14325895 (+)
G370360 NA other upstream 818574 14255803 ~ 14259133 (+)
G371182 NA other downstream 23912 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 691181 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1119228 16218328 ~ 16220933 (+)
G372373 NA other downstream 1635264 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1770056 16870434 ~ 16882185 (+)

Expression


Co-expression Network