Gene
RNA
| Item | Value |
|---|---|
| gene id | G371139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15090967 ~ 15150407 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: rap guanine nucleotide exchange factor 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421797 | True | 397 | lncRNA | 0.54 | 3 | 15090967 | 15150407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518158 | LOC106596183 | coding | upstream | 15409 | 15065627 ~ 15075700 (+) |
| LOC110519479 | LOC106596183 | coding | upstream | 36614 | 15047739 ~ 15054353 (+) |
| LOC110523290 | LOC106596183 | coding | upstream | 56378 | 15027803 ~ 15034589 (+) |
| LOC110518391 | LOC106596183 | coding | upstream | 76355 | 15007790 ~ 15014612 (+) |
| dnlz | dnlz | coding | upstream | 91531 | 14995248 ~ 14999436 (+) |
| LOC110523300 | LOC105028392 | coding | downstream | 314148 | 15464555 ~ 15591443 (+) |
| st6galnac4 | st6galnac4 | coding | downstream | 599784 | 15750191 ~ 15756190 (+) |
| st6galnac6 | sia7f | coding | downstream | 605852 | 15756259 ~ 15772026 (+) |
| LOC110523312 | surf1 | coding | downstream | 638388 | 15788795 ~ 15791028 (+) |
| med22 | med22 | coding | downstream | 645770 | 15796177 ~ 15810502 (+) |
| G371170 | NA | non-coding | upstream | 2427 | 15067025 ~ 15088540 (+) |
| G371159 | NA | non-coding | upstream | 34749 | 15015821 ~ 15056218 (+) |
| G371158 | NA | non-coding | upstream | 40031 | 15010816 ~ 15050936 (+) |
| G371113 | NA | non-coding | upstream | 117893 | 14972729 ~ 14973074 (+) |
| G371206 | NA | non-coding | downstream | 42542 | 15192949 ~ 15193278 (+) |
| G371367 | NA | non-coding | downstream | 105695 | 15256102 ~ 15256318 (+) |
| G371420 | NA | non-coding | downstream | 196721 | 15347128 ~ 15347847 (+) |
| G371452 | NA | non-coding | downstream | 268086 | 15418493 ~ 15418732 (+) |
| G371453 | NA | non-coding | downstream | 268570 | 15418977 ~ 15419301 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 285496 | 14798616 ~ 14805526 (+) |
| G370414 | NA | other | upstream | 722806 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 765072 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 831834 | 14255803 ~ 14259133 (+) |
| G371615 | LOC100194725 | other | downstream | 641152 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 1069199 | 16218328 ~ 16220933 (+) |
| G372373 | NA | other | downstream | 1585235 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 1720027 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 2553706 | 17704113 ~ 17707757 (+) |
