G371206


Basic Information

Item Value
gene id G371206
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15192949 ~ 15193278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421874
gggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctgttgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcaaagaagaagttacaggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU421874 True 330 lncRNA 0.45 1 15192949 15193278

Neighbor

gene id symbol gene type direction distance location
uck1 LOC106569943 coding upstream 47429 15117198 ~ 15187954 (+)
LOC110519478 LOC106596183 coding upstream 96192 15086878 ~ 15096757 (+)
LOC110518158 LOC106596183 coding upstream 117391 15065627 ~ 15075700 (+)
LOC110519479 LOC106596183 coding upstream 138596 15047739 ~ 15054353 (+)
LOC110523290 LOC106596183 coding upstream 158360 15027803 ~ 15034589 (+)
LOC110523300 LOC105028392 coding downstream 271277 15464555 ~ 15591443 (+)
st6galnac4 st6galnac4 coding downstream 556913 15750191 ~ 15756190 (+)
st6galnac6 sia7f coding downstream 562981 15756259 ~ 15772026 (+)
LOC110523312 surf1 coding downstream 595517 15788795 ~ 15791028 (+)
med22 med22 coding downstream 602899 15796177 ~ 15810502 (+)
G371139 NA non-coding upstream 42542 15090967 ~ 15150407 (+)
G371172 LOC106569911 non-coding upstream 90623 15080692 ~ 15102326 (+)
G371171 NA non-coding upstream 92571 15077707 ~ 15100378 (+)
G371170 NA non-coding upstream 104409 15067025 ~ 15088540 (+)
G371367 NA non-coding downstream 62824 15256102 ~ 15256318 (+)
G371420 NA non-coding downstream 153850 15347128 ~ 15347847 (+)
G371452 NA non-coding downstream 225215 15418493 ~ 15418732 (+)
G371453 NA non-coding downstream 225699 15418977 ~ 15419301 (+)
G371454 NA non-coding downstream 228002 15421280 ~ 15421580 (+)
G371182 NA other upstream 64132 15124290 ~ 15128817 (+)
LOC118964542 LOC106569496 other upstream 387478 14798616 ~ 14805526 (+)
G370414 NA other upstream 824788 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 867054 14321104 ~ 14325895 (+)
G371615 LOC100194725 other downstream 598281 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1026328 16218328 ~ 16220933 (+)
G372373 NA other downstream 1542364 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1677156 16870434 ~ 16882185 (+)
G373726 NA other downstream 2510835 17704113 ~ 17707757 (+)

Expression


Co-expression Network