G371364


Basic Information

Item Value
gene id G371364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15254177 ~ 15254802 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422061
GTATATCCCATTTAGGCATTGTGCTAGCTCAAGTTCAGTGTTTTCACCTAAAGTGAGTGTGTGGGGTCTGTATTGGAATCTGGAAAGAGAAGAAAGAAATAGATGGAGAAGCCGATTGGGGGAgagataaatggagagagagatatgctaTATGACTAAAAATGTGGGACTCCTGCTCGTCTTACATCatcaaatcatgggcattaatatggagttggtcccccctttgctgctagaacagcctccactcttctgggaaggctttccactagatgttggaacattgctgtggggacttgcttccattcagccacaagagcattagtgaggtcgggaacTGATGatggccgattaggcctggctcgcagtcggtgttccaattcatcccaaaggtgttcgatggggttgaggttagggctatgtgcaggccagtcaagttcttccacaccgatgtcgacaaaccatttctgtatggaccttgctttgtgcacaggggcattgtcatgctgaaacaggtaaGGGccctccccaaactgttgccacaaagtcacaagcacagaatcatctagaatgtcattgtatgctgtagcgctaagatttcccttcactgggcCAAGCCCAAACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422061 True 626 lncRNA 0.47 1 15254177 15254802

Neighbor

gene id symbol gene type direction distance location
rapgef1b LOC106569917 coding downstream 28845 15149438 ~ 15225332 (-)
LOC110523287 LOC106569911 coding downstream 116150 15135601 ~ 15138027 (-)
LOC118964537 LOC106569911 coding downstream 118698 15134692 ~ 15135479 (-)
LOC118964536 LOC106596987 coding downstream 119672 15133867 ~ 15134505 (-)
LOC118936652 LOC106569911 coding downstream 120718 15081830 ~ 15136742 (-)
setx LOC106569805 coding upstream 355544 15610346 ~ 15679579 (-)
LOC110523302 NA coding upstream 438803 15693396 ~ 15707607 (-)
dolpp1 dolpp1 coding upstream 468987 15723789 ~ 15734869 (-)
miga2 miga2 coding upstream 485271 15740073 ~ 15752753 (-)
spout1 spout1 coding upstream 516103 15770905 ~ 15775789 (-)
G371356 NA non-coding downstream 2052 15251914 ~ 15252125 (-)
G371331 NA non-coding downstream 47854 15204943 ~ 15206323 (-)
G371285 NA non-coding downstream 105176 15148547 ~ 15149001 (-)
G371286 NA non-coding downstream 114104 15119804 ~ 15140073 (-)
G371849 NA non-coding upstream 28158 15282960 ~ 15283473 (-)
G371854 NA non-coding upstream 40846 15295648 ~ 15295975 (-)
G371935 NA non-coding upstream 206473 15461275 ~ 15467100 (-)
G371986 NA non-coding upstream 323289 15578091 ~ 15581405 (-)
G371988 LOC106562870 non-coding upstream 326902 15581704 ~ 15588109 (-)
G371294 LOC106569911 other downstream 129388 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 259018 14988147 ~ 14995197 (-)
G370635 NA other downstream 825586 14427338 ~ 14428591 (-)
G370333 NA other downstream 1045472 14207190 ~ 14208705 (-)
G368921 NA other downstream 2548085 12705566 ~ 12706092 (-)
G372122 NA other upstream 720804 15975606 ~ 15976116 (-)
G372123 NA other upstream 723700 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1679433 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1869235 17124037 ~ 17125807 (-)

Expression


Co-expression Network