Gene
RNA
| Item | Value |
|---|---|
| gene id | G371935 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15461275 ~ 15467100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU422735 | True | 565 | lncRNA | 0.51 | 2 | 15461275 | 15467100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rapgef1b | LOC106569917 | coding | downstream | 235943 | 15149438 ~ 15225332 (-) |
| LOC110523287 | LOC106569911 | coding | downstream | 323248 | 15135601 ~ 15138027 (-) |
| LOC118964537 | LOC106569911 | coding | downstream | 325796 | 15134692 ~ 15135479 (-) |
| LOC118964536 | LOC106596987 | coding | downstream | 326770 | 15133867 ~ 15134505 (-) |
| LOC118936652 | LOC106569911 | coding | downstream | 327816 | 15081830 ~ 15136742 (-) |
| setx | LOC106569805 | coding | upstream | 143246 | 15610346 ~ 15679579 (-) |
| LOC110523302 | NA | coding | upstream | 226505 | 15693396 ~ 15707607 (-) |
| dolpp1 | dolpp1 | coding | upstream | 256689 | 15723789 ~ 15734869 (-) |
| miga2 | miga2 | coding | upstream | 272973 | 15740073 ~ 15752753 (-) |
| spout1 | spout1 | coding | upstream | 303805 | 15770905 ~ 15775789 (-) |
| G371854 | NA | non-coding | downstream | 165300 | 15295648 ~ 15295975 (-) |
| G371849 | NA | non-coding | downstream | 177802 | 15282960 ~ 15283473 (-) |
| G371364 | NA | non-coding | downstream | 206473 | 15254177 ~ 15254802 (-) |
| G371356 | NA | non-coding | downstream | 209150 | 15251914 ~ 15252125 (-) |
| G371331 | NA | non-coding | downstream | 254952 | 15204943 ~ 15206323 (-) |
| G371986 | NA | non-coding | upstream | 110991 | 15578091 ~ 15581405 (-) |
| G371988 | LOC106562870 | non-coding | upstream | 114604 | 15581704 ~ 15588109 (-) |
| G371994 | NA | non-coding | upstream | 126617 | 15593717 ~ 15595284 (-) |
| G371956 | NA | non-coding | upstream | 131137 | 15598237 ~ 15607633 (-) |
| G371954 | NA | non-coding | upstream | 136874 | 15603974 ~ 15607167 (-) |
| G371294 | LOC106569911 | other | downstream | 336486 | 15123475 ~ 15124789 (-) |
| LOC110524957 | LOC106569957 | other | downstream | 466116 | 14988147 ~ 14995197 (-) |
| G370635 | NA | other | downstream | 1032684 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 1252570 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 2755183 | 12705566 ~ 12706092 (-) |
| G372122 | NA | other | upstream | 508506 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 511402 | 15978502 ~ 15981215 (-) |
| LOC110523341 | LOC106569324 | other | upstream | 1467135 | 16909582 ~ 16942359 (-) |
| G373228 | LOC106569424 | other | upstream | 1656937 | 17124037 ~ 17125807 (-) |
