G371495



Basic Information


Item Value
gene id G371495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15489608 ~ 15490263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU422212
GCCCAAGTCCAAATAAATATTTGTAAACCAATgaaaaaaacatagaaaaaagagaATCCCTACACAACCCAAATATCAATAGTCAATACTCCAACAGAAAATGTAAAGGTCCAATGGAAGGCTCTAAAATATTCCATGTATATttccacaaaaaaacatgttgaatGTTGAGTAAAAAGGCCTGAAATTAGTAGCAAACAATGCTCTCCAAACAATGGGCCCGCAGTCTAATTCAAGATGGCACTTGTGGGTTGGACACGTCTccAACCACACCCATACCTGCAACGTTAAAGACCTTCTGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU422212 True 303 lncRNA 0.38 2 15489608 15490263

Neighbor


gene id symbol gene type direction distance location
uck1 LOC106569943 coding upstream 344088 15117198 ~ 15187954 (+)
LOC110519478 LOC106596183 coding upstream 392851 15086878 ~ 15096757 (+)
LOC110518158 LOC106596183 coding upstream 414050 15065627 ~ 15075700 (+)
LOC110519479 LOC106596183 coding upstream 435255 15047739 ~ 15054353 (+)
LOC110523290 LOC106596183 coding upstream 455019 15027803 ~ 15034589 (+)
st6galnac4 st6galnac4 coding downstream 259928 15750191 ~ 15756190 (+)
st6galnac6 sia7f coding downstream 265996 15756259 ~ 15772026 (+)
LOC110523312 surf1 coding downstream 298532 15788795 ~ 15791028 (+)
med22 med22 coding downstream 305914 15796177 ~ 15810502 (+)
usp20 LOC106569850 coding downstream 326537 15816800 ~ 15839459 (+)
G371489 NA non-coding upstream 4619 15478373 ~ 15484989 (+)
G371454 NA non-coding upstream 68028 15421280 ~ 15421580 (+)
G371453 NA non-coding upstream 70307 15418977 ~ 15419301 (+)
G371452 NA non-coding upstream 70876 15418493 ~ 15418732 (+)
G371420 NA non-coding upstream 141761 15347128 ~ 15347847 (+)
G371544 NA non-coding downstream 123942 15614205 ~ 15615135 (+)
G371567 LOC106569805 non-coding downstream 160715 15650978 ~ 15651436 (+)
G371597 NA non-coding downstream 197963 15688226 ~ 15688447 (+)
G371598 NA non-coding downstream 199788 15690051 ~ 15698691 (+)
G371610 NA non-coding downstream 222707 15712970 ~ 15713201 (+)
G371182 NA other upstream 360791 15124290 ~ 15128817 (+)
LOC118964542 LOC106569496 other upstream 684137 14798616 ~ 14805526 (+)
G370414 NA other upstream 1121447 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 1163713 14321104 ~ 14325895 (+)
G371615 LOC100194725 other downstream 301296 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 729343 16218328 ~ 16220933 (+)
G372373 NA other downstream 1245379 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1380171 16870434 ~ 16882185 (+)
G373726 NA other downstream 2213850 17704113 ~ 17707757 (+)

Expression



Co-expression Network