G371994


Basic Information

Item Value
gene id G371994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15593717 ~ 15595284 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422799
gcttccgttctgtttttacatttctagtggttattgacccagtctgtacactctcttatggattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatggattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatggattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactctcttatggattctgcttccgttctgttttttacatttctagtggttattgactcagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttctgttctgtttttacatttctagtggttattgacccagtctgtacactctcttatggattctgcttccgttctgttttttacatttctagtggttattgactcagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactctcttatggattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttccgttctgtttttacatttctagtggttattgacccagtctgtacactcttatagattctgcttccgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422799 True 916 lncRNA 0.38 2 15593717 15595284

Neighbor

gene id symbol gene type direction distance location
rapgef1b LOC106569917 coding downstream 368385 15149438 ~ 15225332 (-)
LOC110523287 LOC106569911 coding downstream 455690 15135601 ~ 15138027 (-)
LOC118964537 LOC106569911 coding downstream 458238 15134692 ~ 15135479 (-)
LOC118964536 LOC106596987 coding downstream 459212 15133867 ~ 15134505 (-)
LOC118936652 LOC106569911 coding downstream 460258 15081830 ~ 15136742 (-)
setx LOC106569805 coding upstream 15062 15610346 ~ 15679579 (-)
LOC110523302 NA coding upstream 98321 15693396 ~ 15707607 (-)
dolpp1 dolpp1 coding upstream 128505 15723789 ~ 15734869 (-)
miga2 miga2 coding upstream 144789 15740073 ~ 15752753 (-)
spout1 spout1 coding upstream 175621 15770905 ~ 15775789 (-)
G371988 LOC106562870 non-coding downstream 5608 15581704 ~ 15588109 (-)
G371986 NA non-coding downstream 12312 15578091 ~ 15581405 (-)
G371935 NA non-coding downstream 126617 15461275 ~ 15467100 (-)
G371854 NA non-coding downstream 297742 15295648 ~ 15295975 (-)
G371849 NA non-coding downstream 310244 15282960 ~ 15283473 (-)
G371956 NA non-coding upstream 2953 15598237 ~ 15607633 (-)
G371954 NA non-coding upstream 8690 15603974 ~ 15607167 (-)
G372015 NA non-coding upstream 90614 15685898 ~ 15686111 (-)
G372054 NA non-coding upstream 221556 15816840 ~ 15817633 (-)
G371294 LOC106569911 other downstream 468928 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 598558 14988147 ~ 14995197 (-)
G370635 NA other downstream 1165126 14427338 ~ 14428591 (-)
G370333 NA other downstream 1385012 14207190 ~ 14208705 (-)
G368921 NA other downstream 2887625 12705566 ~ 12706092 (-)
G372122 NA other upstream 380322 15975606 ~ 15976116 (-)
G372123 NA other upstream 383218 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1338951 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1528753 17124037 ~ 17125807 (-)

Expression


Co-expression Network