Gene
RNA
| Item | Value |
|---|---|
| gene id | G371544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15614205 ~ 15615135 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable helicase senataxin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU422261 | True | 250 | lncRNA | 0.58 | 2 | 15614205 | 15615135 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523300 | LOC105028392 | coding | upstream | 22762 | 15464555 ~ 15591443 (+) |
| uck1 | LOC106569943 | coding | upstream | 468685 | 15117198 ~ 15187954 (+) |
| LOC110519478 | LOC106596183 | coding | upstream | 517448 | 15086878 ~ 15096757 (+) |
| LOC110518158 | LOC106596183 | coding | upstream | 538647 | 15065627 ~ 15075700 (+) |
| LOC110519479 | LOC106596183 | coding | upstream | 559852 | 15047739 ~ 15054353 (+) |
| st6galnac4 | st6galnac4 | coding | downstream | 135056 | 15750191 ~ 15756190 (+) |
| st6galnac6 | sia7f | coding | downstream | 141124 | 15756259 ~ 15772026 (+) |
| LOC110523312 | surf1 | coding | downstream | 173660 | 15788795 ~ 15791028 (+) |
| med22 | med22 | coding | downstream | 181042 | 15796177 ~ 15810502 (+) |
| usp20 | LOC106569850 | coding | downstream | 201665 | 15816800 ~ 15839459 (+) |
| G371495 | NA | non-coding | upstream | 123942 | 15489608 ~ 15490263 (+) |
| G371489 | NA | non-coding | upstream | 129216 | 15478373 ~ 15484989 (+) |
| G371454 | NA | non-coding | upstream | 192625 | 15421280 ~ 15421580 (+) |
| G371453 | NA | non-coding | upstream | 194904 | 15418977 ~ 15419301 (+) |
| G371452 | NA | non-coding | upstream | 195473 | 15418493 ~ 15418732 (+) |
| G371567 | LOC106569805 | non-coding | downstream | 35843 | 15650978 ~ 15651436 (+) |
| G371597 | NA | non-coding | downstream | 73091 | 15688226 ~ 15688447 (+) |
| G371598 | NA | non-coding | downstream | 74916 | 15690051 ~ 15698691 (+) |
| G371610 | NA | non-coding | downstream | 97835 | 15712970 ~ 15713201 (+) |
| G371612 | NA | non-coding | downstream | 99194 | 15714329 ~ 15714595 (+) |
| G371182 | NA | other | upstream | 485388 | 15124290 ~ 15128817 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 808734 | 14798616 ~ 14805526 (+) |
| G370414 | NA | other | upstream | 1246044 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 1288310 | 14321104 ~ 14325895 (+) |
| G371615 | LOC100194725 | other | downstream | 176424 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 604471 | 16218328 ~ 16220933 (+) |
| G372373 | NA | other | downstream | 1120507 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 1255299 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 2088978 | 17704113 ~ 17707757 (+) |
