G371598



Basic Information


Item Value
gene id G371598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15690051 ~ 15698691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU422323
AAATGGAGTCCCTAGAGAAAGCAAGTGAAAGATTGGTGTCAGGGATGGAGCGGCAGTATTATGATAATGAGACGTGTCCTTGGAAaacggaggaggaatggagggaaaaagagaatGGGGACGAAGAGGttactcacccagatcatttaccccattcccgcctgatcgtcagaggattccgcttccccattggatccacctatttactcccatcaactcaccaccgctacccgctacaccacctggatatatc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU422323 True 253 lncRNA 0.49 2 15690051 15698691

Neighbor


gene id symbol gene type direction distance location
LOC110523300 LOC105028392 coding upstream 98608 15464555 ~ 15591443 (+)
uck1 LOC106569943 coding upstream 544531 15117198 ~ 15187954 (+)
LOC110519478 LOC106596183 coding upstream 593294 15086878 ~ 15096757 (+)
LOC110518158 LOC106596183 coding upstream 614493 15065627 ~ 15075700 (+)
LOC110519479 LOC106596183 coding upstream 635698 15047739 ~ 15054353 (+)
st6galnac4 st6galnac4 coding downstream 51500 15750191 ~ 15756190 (+)
st6galnac6 sia7f coding downstream 57568 15756259 ~ 15772026 (+)
LOC110523312 surf1 coding downstream 90104 15788795 ~ 15791028 (+)
med22 med22 coding downstream 97486 15796177 ~ 15810502 (+)
usp20 LOC106569850 coding downstream 118109 15816800 ~ 15839459 (+)
G371597 NA non-coding upstream 1604 15688226 ~ 15688447 (+)
G371567 LOC106569805 non-coding upstream 38615 15650978 ~ 15651436 (+)
G371544 NA non-coding upstream 74916 15614205 ~ 15615135 (+)
G371495 NA non-coding upstream 199788 15489608 ~ 15490263 (+)
G371489 NA non-coding upstream 205062 15478373 ~ 15484989 (+)
G371610 NA non-coding downstream 14279 15712970 ~ 15713201 (+)
G371612 NA non-coding downstream 15638 15714329 ~ 15714595 (+)
G371615 LOC100194725 non-coding downstream 92868 15791559 ~ 15795122 (+)
G371632 NA non-coding downstream 116514 15815205 ~ 15815749 (+)
G371639 NA non-coding downstream 152679 15851370 ~ 15851721 (+)
G371182 NA other upstream 561234 15124290 ~ 15128817 (+)
LOC118964542 LOC106569496 other upstream 884580 14798616 ~ 14805526 (+)
G370414 NA other upstream 1321890 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 1364156 14321104 ~ 14325895 (+)
G372281 LOC106569177 other downstream 520915 16218328 ~ 16220933 (+)
G372373 NA other downstream 1036951 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1171743 16870434 ~ 16882185 (+)
G373726 NA other downstream 2005422 17704113 ~ 17707757 (+)

Expression



Co-expression Network