G372054


Basic Information

Item Value
gene id G372054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15816840 ~ 15817633 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422861
GATTTCTGCAGAAGGTCCTCCTTGGTGACCTCCCCTATGGATTCCAGGTGGGGACAAATGTCCCCCAGGTCACTCATGTTTATTCAACTTCTTCTAAAGATCTAGCTAATAATACACAAAAATATGAATCTGATATTTTGTTTGTGTAGATAAAACAATACATTGAAGCAAGCTGACATCAGTAAGTGGCTACAATAAGTAGACACACTTCAATCAAGGGGTGTGTCTGACTCTGCCAGAGTAGACTATTACAAAACGTATGTCGAATTAGTCGTACTGTAGCAGGGAATGTCGCCGACAATGATACTCTTTAGTTTAGCTAGGAAGCTAACGTTTCTCTACTCACTCAAAGCTTTGAAATTACTGCATTTACTAGTAACTAGCTGCCTGACAACCCATCGACATTCTAGAAATGGATAATCAATTAACTAAACATCTAACTATCGCACATCAGCCAACACAGGTACACTTTTTTAATTTTATAAAACCAATTCCTGCACTATGGTTTGGCTAGAGACACCGAAATCTGACAGCTCTGCTGCAAACTGAAGGCCCTGTTTTTCCACTCCTAACTAGCATCAAAAATCGATGATGACATCGACAACAAATACATGAATCTCAACATGAGCTATTTACCAACACCAGGCGATGTCACAACAATATTCAGATAAGTTCATTTAAGGGGAAATGTGCGTTAAAAATAGGTAAACACCTAGCTAGCGATGGTATCCTGGCTAGCTACTGTGGCTGTTGTACGGAATAGAGATAGATACCCCATCCCACTTGCTCCCCCG

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 20

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422861 True 794 lncRNA 0.40 1 15816840 15817633

Neighbor

gene id symbol gene type direction distance location
c5h9orf78 cssa01h9orf78 coding downstream 2038 15810578 ~ 15814802 (-)
LOC118964750 NA coding downstream 21303 15795463 ~ 15795537 (-)
rpl7a rpl7a coding downstream 21427 15791511 ~ 15795413 (-)
LOC118964755 NA coding downstream 21631 15795141 ~ 15795209 (-)
LOC118964756 NA coding downstream 22033 15794739 ~ 15794807 (-)
LOC118964568 LOC106568982 coding upstream 55145 15872778 ~ 15895178 (-)
LOC118964569 LOC106594099 coding upstream 81044 15898677 ~ 15899294 (-)
LOC110523317 LOC106568982 coding upstream 84583 15902216 ~ 15926643 (-)
garnl3 LOC106562762 coding upstream 121318 15938951 ~ 16121310 (-)
LOC118964745 NA coding upstream 386057 16203690 ~ 16205002 (-)
LOC110523302 NA non-coding downstream 109313 15693396 ~ 15707607 (-)
G372015 NA non-coding downstream 130729 15685898 ~ 15686111 (-)
G371956 NA non-coding downstream 209207 15598237 ~ 15607633 (-)
G371954 NA non-coding downstream 209673 15603974 ~ 15607167 (-)
G371994 NA non-coding downstream 221556 15593717 ~ 15595284 (-)
G372056 NA non-coding upstream 1351 15818984 ~ 15819222 (-)
G372058 NA non-coding upstream 4052 15821685 ~ 15821906 (-)
G372059 NA non-coding upstream 4825 15822458 ~ 15822944 (-)
G372060 NA non-coding upstream 5668 15823301 ~ 15823630 (-)
G372061 NA non-coding upstream 6204 15823837 ~ 15824116 (-)
G371294 LOC106569911 other downstream 692051 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 821681 14988147 ~ 14995197 (-)
G370635 NA other downstream 1388249 14427338 ~ 14428591 (-)
G370333 NA other downstream 1608135 14207190 ~ 14208705 (-)
G372122 NA other upstream 157973 15975606 ~ 15976116 (-)
G372123 NA other upstream 160869 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1116602 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1306404 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1671393 17483696 ~ 17521507 (-)

Expression


Co-expression Network