Gene
RNA
| Item | Value |
|---|---|
| gene id | G372058 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15821685 ~ 15821906 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU422865 | True | 222 | lncRNA | 0.41 | 1 | 15821685 | 15821906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c5h9orf78 | cssa01h9orf78 | coding | downstream | 6883 | 15810578 ~ 15814802 (-) |
| LOC118964750 | NA | coding | downstream | 26148 | 15795463 ~ 15795537 (-) |
| LOC118964755 | NA | coding | downstream | 26476 | 15795141 ~ 15795209 (-) |
| LOC118964756 | NA | coding | downstream | 26878 | 15794739 ~ 15794807 (-) |
| LOC118964747 | NA | coding | downstream | 27270 | 15794344 ~ 15794415 (-) |
| LOC118964568 | LOC106568982 | coding | upstream | 50872 | 15872778 ~ 15895178 (-) |
| LOC118964569 | LOC106594099 | coding | upstream | 76771 | 15898677 ~ 15899294 (-) |
| LOC110523317 | LOC106568982 | coding | upstream | 80310 | 15902216 ~ 15926643 (-) |
| garnl3 | LOC106562762 | coding | upstream | 117045 | 15938951 ~ 16121310 (-) |
| LOC118964745 | NA | coding | upstream | 381784 | 16203690 ~ 16205002 (-) |
| G372056 | NA | non-coding | downstream | 2463 | 15818984 ~ 15819222 (-) |
| G372054 | NA | non-coding | downstream | 4052 | 15816840 ~ 15817633 (-) |
| LOC110523302 | NA | non-coding | downstream | 114158 | 15693396 ~ 15707607 (-) |
| G372015 | NA | non-coding | downstream | 135574 | 15685898 ~ 15686111 (-) |
| G371956 | NA | non-coding | downstream | 214052 | 15598237 ~ 15607633 (-) |
| G372059 | NA | non-coding | upstream | 552 | 15822458 ~ 15822944 (-) |
| G372060 | NA | non-coding | upstream | 1395 | 15823301 ~ 15823630 (-) |
| G372061 | NA | non-coding | upstream | 1931 | 15823837 ~ 15824116 (-) |
| G372067 | NA | non-coding | upstream | 7170 | 15829076 ~ 15831952 (-) |
| G372072 | NA | non-coding | upstream | 15365 | 15837271 ~ 15839443 (-) |
| G371294 | LOC106569911 | other | downstream | 696896 | 15123475 ~ 15124789 (-) |
| LOC110524957 | LOC106569957 | other | downstream | 826526 | 14988147 ~ 14995197 (-) |
| G370635 | NA | other | downstream | 1393094 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 1612980 | 14207190 ~ 14208705 (-) |
| G372122 | NA | other | upstream | 153700 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 156596 | 15978502 ~ 15981215 (-) |
| LOC110523341 | LOC106569324 | other | upstream | 1112329 | 16909582 ~ 16942359 (-) |
| G373228 | LOC106569424 | other | upstream | 1302131 | 17124037 ~ 17125807 (-) |
| LOC110523354 | LOC106569496 | other | upstream | 1667120 | 17483696 ~ 17521507 (-) |
