G371653


Basic Information

Item Value
gene id G371653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15869773 ~ 15870026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422392
ACAGGATGTCCTGGCCGGAGGCCCATATTTGGACATGTATACGTCATCATGGACACAGGGTCATAAATAAAGATTTTGACCCGTGCTGTCTACTTTATTCTCTTTCACAGAGCAGGGGGAACAGCCTGGAGTCCTGTCTTCTTCAGTGTCTCCACCACCTCAGCCAACATGTTATTTTTCCTCAGAGTAGGCCTTGGAGTGAAGGTCTGATTGCACTGAGGACAGCTGTAGATGCCCTGATCATCTTGATCCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422392 True 254 lncRNA 0.48 1 15869773 15870026

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 11413 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 30314 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 38032 15829533 ~ 15831741 (+)
med22 med22 coding upstream 59271 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 78745 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 564237 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 584569 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 646774 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 820879 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 842156 16712182 ~ 16726009 (+)
G371639 NA non-coding upstream 18052 15851370 ~ 15851721 (+)
G371632 NA non-coding upstream 54024 15815205 ~ 15815749 (+)
G371615 LOC100194725 non-coding upstream 76149 15791559 ~ 15795122 (+)
G371612 NA non-coding upstream 155178 15714329 ~ 15714595 (+)
G371610 NA non-coding upstream 156572 15712970 ~ 15713201 (+)
G371656 NA non-coding downstream 17212 15887238 ~ 15916078 (+)
G371661 LOC106594099 non-coding downstream 24349 15894375 ~ 15899296 (+)
G371672 NA non-coding downstream 56740 15926766 ~ 15939264 (+)
G371671 NA non-coding downstream 65282 15935308 ~ 15936996 (+)
G371682 NA non-coding downstream 71636 15941662 ~ 15945451 (+)
G371182 NA other upstream 740956 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 816217 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1064302 14798616 ~ 14805526 (+)
G370414 NA other upstream 1501612 14367672 ~ 14368161 (+)
G372281 LOC106569177 other downstream 349580 16218328 ~ 16220933 (+)
G372373 NA other downstream 865616 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1000408 16870434 ~ 16882185 (+)
G373726 NA other downstream 1834087 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 2197417 18067350 ~ 18177035 (+)

Expression


Co-expression Network