G371682


Basic Information

Item Value
gene id G371682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15941662 ~ 15945451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422434
CAAAAATGAGAAACTTCTAGGTACGTGTGCTTTTATCACGTTAGCAAATGATCAGCCAAGCCGCACTTCTTAACACCCGTCcccttaacctggaagccagctgcatcaatgtgtcagaggaaacaccattcaactgacgaccggagtcagcctgcaggcgcccgtcCCTCCAAATGTATGACTTCTAATCACTGCTGCTGTCTAGGTTTTGAGTTGTTGAAGATGATATGGGTCCTTTACCTGTCGCTGCTGGTGGAGGTCAATGTTCGTGTCTTTATCTCTTCCTCAGTGGTCTTCTTGctcatcttcctctgtttgccCGTGCTACTGTCTATCTTACTGCTAGGCTCCTCGGTCAAGCCTGGGAGGAACACACAGAATAAGATCATTCAGTAGGGGAATGTCATGCCCACTCAGTAAGAACCGACCTCAACACAACCGCTCAGTTAACCACTTACAGTAGATTAGTATGCtaggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctaggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacaGTAGATTAGGATGCTGGGATAGTTCTAGTGGGTTACAGTAGATTAGTatgctgggatggttctagtgggttagaTAGGTTAGTGTGCTGGGATGGTTCTAGGGGGTTACAGTAGATTAGTCtgctgggatggttctagtgggttacagtagactagtatgctgggatggttctagtgggttagaTAGGTTAGTGTGCTGGGATGGTTCTAGGGGGTTACAGTAGATTAGTatgctgggatggttctagtgggttacagtagactagtatgctgggatggttctagtgggttacagtagattaatatgctgggatggttctagtgggttagataggttagtgtgctgggatggttctagtaggttacagtagattagtgtgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtaggttacagtagattagtatgctgggatggttctagtgggttacaGTAGATTAGGATGCTGGGATAGTTCTAGTGGGTTACAGTAGATTAGTatgctgggatggttctagtgggttagataggttagtgtgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattatcatgctgggatggttctagtgggttacaGTAGACTAGTATGCtaggatggttctagtgggttagataggttagtgtgctgggatggttctagtgggttagataggttagtgtgctgggatggttctagtgggttacagtagactagtatgctgggatggttctagtgggttataGTAGATTAGTatgctgggatggttctagtgggttagataggttagtgtgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttataGTAGATTAGTatgctgggatggttctagtgggttacagtagattagtatgctaggatggttctagtgggttataGTAGATTAGTatgctgggatggttctagtgggttagaTAGGTTAGTGTGCTGGGATGGTTCTAGGGGGTTACAGTAGATTAGTCtgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttagataggttagtgtgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttacagtagattagtatgctgggatggttctagtgggttataGTAGATTAGTatgctgggatggttctagtgggttacagtagattagtatgctaggatggttctag

Function

NR:

description
GTPase-activating Rap/Ran-GAP domain-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422434 True 2069 lncRNA 0.45 2 15941662 15945451

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 83302 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 102203 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 109921 15829533 ~ 15831741 (+)
med22 med22 coding upstream 131160 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 150634 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 488812 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 509144 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 571349 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 745454 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 766731 16712182 ~ 16726009 (+)
G371672 NA non-coding upstream 2398 15926766 ~ 15939264 (+)
G371671 NA non-coding upstream 4666 15935308 ~ 15936996 (+)
G371656 NA non-coding upstream 25584 15887238 ~ 15916078 (+)
G371661 LOC106594099 non-coding upstream 42366 15894375 ~ 15899296 (+)
G371653 NA non-coding upstream 71636 15869773 ~ 15870026 (+)
G371689 NA non-coding downstream 7151 15952602 ~ 15957635 (+)
G371706 NA non-coding downstream 44435 15989886 ~ 15992865 (+)
G371733 NA non-coding downstream 86228 16031679 ~ 16032866 (+)
G371734 NA non-coding downstream 87003 16032454 ~ 16032686 (+)
G371743 NA non-coding downstream 109147 16054598 ~ 16055043 (+)
G371615 LOC100194725 other upstream 146540 15791559 ~ 15795122 (+)
G371182 NA other upstream 812845 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 888106 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1136191 14798616 ~ 14805526 (+)
G370414 NA other upstream 1573501 14367672 ~ 14368161 (+)
G372281 LOC106569177 other downstream 274155 16218328 ~ 16220933 (+)
G372373 NA other downstream 790191 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 924983 16870434 ~ 16882185 (+)
G373726 NA other downstream 1758662 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 2121992 18067350 ~ 18177035 (+)

Expression


Co-expression Network