Gene
RNA
| Item | Value |
|---|---|
| gene id | G371689 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15952602 ~ 15957635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU422442 | False | 378 | lncRNA | 0.49 | 2 | 15952602 | 15957635 |
| TU422443 | True | 378 | lncRNA | 0.49 | 2 | 15952602 | 15957635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptges | ptges | coding | upstream | 94242 | 15852569 ~ 15858360 (+) |
| usp20 | LOC106569850 | coding | upstream | 113143 | 15816800 ~ 15839459 (+) |
| LOC118964570 | NA | coding | upstream | 120861 | 15829533 ~ 15831741 (+) |
| med22 | med22 | coding | upstream | 142100 | 15796177 ~ 15810502 (+) |
| LOC110523312 | surf1 | coding | upstream | 161574 | 15788795 ~ 15791028 (+) |
| LOC110523326 | dusp26 | coding | downstream | 476628 | 16434263 ~ 16437732 (+) |
| LOC110523327 | LOC105015301 | coding | downstream | 496960 | 16454595 ~ 16470342 (+) |
| pargl | LOC106569224 | coding | downstream | 559165 | 16516800 ~ 16557705 (+) |
| LOC110523336 | NA | coding | downstream | 733270 | 16690905 ~ 16694551 (+) |
| polm | LOC106569276 | coding | downstream | 754547 | 16712182 ~ 16726009 (+) |
| G371682 | NA | non-coding | upstream | 7151 | 15941662 ~ 15945451 (+) |
| G371672 | NA | non-coding | upstream | 13338 | 15926766 ~ 15939264 (+) |
| G371671 | NA | non-coding | upstream | 15606 | 15935308 ~ 15936996 (+) |
| G371656 | NA | non-coding | upstream | 36524 | 15887238 ~ 15916078 (+) |
| G371661 | LOC106594099 | non-coding | upstream | 53306 | 15894375 ~ 15899296 (+) |
| G371706 | NA | non-coding | downstream | 32251 | 15989886 ~ 15992865 (+) |
| G371733 | NA | non-coding | downstream | 74044 | 16031679 ~ 16032866 (+) |
| G371734 | NA | non-coding | downstream | 74819 | 16032454 ~ 16032686 (+) |
| G371743 | NA | non-coding | downstream | 96963 | 16054598 ~ 16055043 (+) |
| G371748 | NA | non-coding | downstream | 102378 | 16060013 ~ 16060423 (+) |
| G371615 | LOC100194725 | other | upstream | 157480 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 823785 | 15124290 ~ 15128817 (+) |
| LOC110519479 | LOC106596183 | other | upstream | 899046 | 15047739 ~ 15054353 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 1147131 | 14798616 ~ 14805526 (+) |
| G370414 | NA | other | upstream | 1584441 | 14367672 ~ 14368161 (+) |
| G372281 | LOC106569177 | other | downstream | 261971 | 16218328 ~ 16220933 (+) |
| G372373 | NA | other | downstream | 778007 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 912799 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 1746478 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 2109808 | 18067350 ~ 18177035 (+) |
