G371706


Basic Information

Item Value
gene id G371706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15989886 ~ 15992865 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422464
gtctgtttctctctttcacttGCTTCCTTCAtatttgtccctctctctgtgttatttctccctctctctctgtgttctttctccctctctctgtgttctttctccctctctatctgtgttctttctccctctctctctgtgttctttctccctctctctctgtgttctttctccctctctatctgtgttctttctccctctctctctgtgttctttctccctctctgtgttctttctccctctctgtgttctttctccctctgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctgtgttctttctccctctgtctctctgtgttctttctccctctctctctgtgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctgttctttctccctctctctctgtgttctttcttcctctctgtgttctttccccctctgtgttctttctccctctctctgtgttctttctccctctctctgtgttctttctccctctctctctgtgttgtttctccctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctctctgtgttctttctcgctctctctctctgtgttctttctccctctccttctctgtgttctttctccctctctctctgtgtgttctttctccctctctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctgtgttatttccccctctgtgttctttctccctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctgtgttatttctccctctctctctctgtgttctttctcgctctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgtgttctttctccctctctctctgtgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctctctctctgtgttctttctccctctctctctgtgttctttctccctctgtgctctttctccctctctctctgttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422464 True 1523 lncRNA 0.47 2 15989886 15992865

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 131526 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 150427 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 158145 15829533 ~ 15831741 (+)
med22 med22 coding upstream 179384 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 198858 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 441398 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 461730 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 523935 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 698040 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 719317 16712182 ~ 16726009 (+)
G371689 NA non-coding upstream 32251 15952602 ~ 15957635 (+)
G371682 NA non-coding upstream 44435 15941662 ~ 15945451 (+)
G371672 NA non-coding upstream 50622 15926766 ~ 15939264 (+)
G371671 NA non-coding upstream 52890 15935308 ~ 15936996 (+)
G371656 NA non-coding upstream 73808 15887238 ~ 15916078 (+)
G371733 NA non-coding downstream 38814 16031679 ~ 16032866 (+)
G371734 NA non-coding downstream 39589 16032454 ~ 16032686 (+)
G371743 NA non-coding downstream 61733 16054598 ~ 16055043 (+)
G371748 NA non-coding downstream 67148 16060013 ~ 16060423 (+)
G371818 NA non-coding downstream 168829 16161694 ~ 16165804 (+)
G371615 LOC100194725 other upstream 194764 15791559 ~ 15795122 (+)
G371182 NA other upstream 861069 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 936330 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1184415 14798616 ~ 14805526 (+)
G370414 NA other upstream 1621725 14367672 ~ 14368161 (+)
G372281 LOC106569177 other downstream 226741 16218328 ~ 16220933 (+)
G372373 NA other downstream 742777 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 877569 16870434 ~ 16882185 (+)
G373726 NA other downstream 1711248 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 2074578 18067350 ~ 18177035 (+)

Expression


Co-expression Network