G372130


Basic Information

Item Value
gene id G372130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15990650 ~ 15995471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422985
agaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagagagggagaaagaacacagagagggagaaagaacacagagagagagagagagggagaaagaacagagagagggagaaagaacacagagagagagagggagaaagaacacagagggagaaagaacacagagagagagagagggagaaagaacacacagagagagggagaaagaacagagagagagagggagaaagaacacacagagagagggagaaagaacagagagagagggagaaagaacacagatagagagggagaaagaacatagagagagagagggagaaagaacacacagagagagagggagaaagaacacgcagagagagagggagaaagaacacacagagagagggagaaagaacagagagagagggagaaagaacacagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacacagagagaaagggagaaagaacacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagagcgagaaagaacacagagagagagagggagaaataacacagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagggagaaagaacacagagggggaaataacacagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacagagagagagggagaaagaacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagggagaaagaacacacagagagagagggagaaagaacacagagagagagagggagaaagaacacagagagagagagagggagaaagaacacacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422985 True 1279 lncRNA 0.48 2 15990650 15995471

Neighbor

gene id symbol gene type direction distance location
LOC110523317 LOC106568982 coding downstream 64007 15902216 ~ 15926643 (-)
LOC118964569 LOC106594099 coding downstream 91356 15898677 ~ 15899294 (-)
LOC118964568 LOC106568982 coding downstream 95472 15872778 ~ 15895178 (-)
c5h9orf78 cssa01h9orf78 coding downstream 175848 15810578 ~ 15814802 (-)
LOC118964750 NA coding downstream 195113 15795463 ~ 15795537 (-)
LOC118964745 NA coding upstream 208219 16203690 ~ 16205002 (-)
si:dkey-34e4.1 LOC106569177 coding upstream 222843 16218314 ~ 16410253 (-)
LOC110523325 LOC106569195 coding upstream 421510 16416981 ~ 16422022 (-)
LOC110522841 LOC106569125 coding upstream 432032 16427503 ~ 16430780 (-)
ppiab ppia1 coding upstream 478619 16474090 ~ 16479578 (-)
G372115 NA non-coding downstream 33053 15952602 ~ 15957597 (-)
G372113 NA non-coding downstream 50093 15939731 ~ 15940557 (-)
G372102 NA non-coding downstream 73605 15916550 ~ 15917045 (-)
G372063 LOC105015305 non-coding downstream 84422 15872828 ~ 15906228 (-)
G372093 NA non-coding downstream 120770 15869563 ~ 15869880 (-)
G372139 NA non-coding upstream 13817 16009288 ~ 16009780 (-)
G372148 NA non-coding upstream 24640 16020111 ~ 16059536 (-)
G372155 NA non-coding upstream 35449 16030920 ~ 16031488 (-)
G372156 NA non-coding upstream 36241 16031712 ~ 16033430 (-)
G372160 NA non-coding upstream 46687 16042158 ~ 16042534 (-)
G372123 NA other downstream 9435 15978502 ~ 15981215 (-)
G372122 NA other downstream 14534 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 292321 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 865861 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 995491 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 938764 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1128566 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1493555 17483696 ~ 17521507 (-)
G374189 NA other upstream 2007349 18002820 ~ 18003170 (-)
G374786 NA other upstream 2562669 18558140 ~ 18559167 (-)

Expression


Co-expression Network