G371734



Basic Information


Item Value
gene id G371734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16032454 ~ 16032686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU422493
gttaattcagcgtggttacagggttaattcagagtggttacagggttaattccatagTGGTTACAGgtttaaaacagaaacaactcaaaaGGTTACTTTTAAGTAttaattccgagtggttacagggttaactcagtgtggttacagggttaattcagcgtggttacagggttaattcagtgtggttacagggttaattcagcgtggttac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU422493 True 211 lncRNA 0.39 2 16032454 16032686

Neighbor


gene id symbol gene type direction distance location
ptges ptges coding upstream 174094 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 192995 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 200713 15829533 ~ 15831741 (+)
med22 med22 coding upstream 221952 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 241426 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 401577 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 421909 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 484114 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 658219 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 679496 16712182 ~ 16726009 (+)
G371706 NA non-coding upstream 39589 15989886 ~ 15992865 (+)
G371689 NA non-coding upstream 74819 15952602 ~ 15957635 (+)
G371682 NA non-coding upstream 87003 15941662 ~ 15945451 (+)
G371672 NA non-coding upstream 93190 15926766 ~ 15939264 (+)
G371743 NA non-coding downstream 21912 16054598 ~ 16055043 (+)
G371748 NA non-coding downstream 27327 16060013 ~ 16060423 (+)
G371818 NA non-coding downstream 129008 16161694 ~ 16165804 (+)
G371819 NA non-coding downstream 131151 16163837 ~ 16164994 (+)
G372255 NA non-coding downstream 168097 16200783 ~ 16201146 (+)
G371615 LOC100194725 other upstream 237332 15791559 ~ 15795122 (+)
G371182 NA other upstream 903637 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 978898 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1226983 14798616 ~ 14805526 (+)
G370414 NA other upstream 1664293 14367672 ~ 14368161 (+)
G372281 LOC106569177 other downstream 186920 16218328 ~ 16220933 (+)
G372373 NA other downstream 702956 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 837748 16870434 ~ 16882185 (+)
G373726 NA other downstream 1671427 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 2034757 18067350 ~ 18177035 (+)

Expression



Co-expression Network