G372192


Basic Information

Item Value
gene id G372192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16100379 ~ 16102638 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423053
tacaaatacatttaaaaaaacaaccgatttaatcggtatagaatttttttgtcctccaataatcggtatcggtgttggaaaatcataatcggtcgacctccaaTTTCTATCATCCATCCCTGTTATCAATCCATCCCTATTATCCACCTATCCCTGTCATCTATCCATCCctgtcatccatccatccctgttATCTATACATCCCTGTTATCAATCCAtccctatcatccatccatccgtgTTATCAtccctatcatccatccatccatccatctctattATCCACCTATCCCTGTTATCTATCCATCCCTGTTATCAATCCAtccctatcatccatccatccctgttATCTATCCATCCCTGTTATCAATCCATCCCTGTTATCAATCCATCCCTGTTATCAATCCATCCCTGTTATCAATCCAtccctatcatctatccatccctGTTATCAATCCATCCCTATCATCCACCTATCCCTGTTATCTATCCATCCCTGTTATCAATCCAtccctatcatccatccatccctgtcATCTATCCATCCCTGTTATCAATCCAtccctatcatccatccatccatctctattatccatccatccctgttattcatccatc
>TU423054
tacaaatacatttaaaaaaacaaccgatttaatcggtatagaatttttttgtcctccaataatcggtatcggtgttggaaaatcataatcggtcgacctccaaTTTCTATCATCCATCCCTGTTATCAATCCATCCCTATTATCCACCTATCCCTGTCATCTATCCATCCctgtcatccatccatccctgttATCTATACATCCCTGTTATCAATCCAtccctatcatccatccatccgtgTTATCAtccctatcatccatccatccatctctattATCCACCTATCCCTGTTATCTATCCATCTCTGTTATCAATCCAtccctatcatccatccatccctgttATCATCCCtatcattcatccatccatctctatTATCCACCTATCCCTGTTATCTATCCATCGCTGTTATCAATCCATCCCTATCATCCATCATCCCTGTTATCTATCCCATCCCTGGTATCAATCCATCCCTATCATCCACCTATCCCTGTTATCTATCCATCCCTGTTATCAATCCAtccctatcatccatccatccctgtcATCTATCCATCCCTGTTATCAATCCAtccctatcatccatccatccatctctattatccatccatccctgttattcatccatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423053 False 618 lncRNA 0.41 3 16100379 16102638
TU423054 True 630 lncRNA 0.41 3 16100379 16102638

Neighbor

gene id symbol gene type direction distance location
LOC110523317 LOC106568982 coding downstream 173736 15902216 ~ 15926643 (-)
LOC118964569 LOC106594099 coding downstream 201085 15898677 ~ 15899294 (-)
LOC118964568 LOC106568982 coding downstream 205201 15872778 ~ 15895178 (-)
c5h9orf78 cssa01h9orf78 coding downstream 285577 15810578 ~ 15814802 (-)
LOC118964750 NA coding downstream 304842 15795463 ~ 15795537 (-)
LOC118964745 NA coding upstream 101052 16203690 ~ 16205002 (-)
si:dkey-34e4.1 LOC106569177 coding upstream 115676 16218314 ~ 16410253 (-)
LOC110523325 LOC106569195 coding upstream 314343 16416981 ~ 16422022 (-)
LOC110522841 LOC106569125 coding upstream 324865 16427503 ~ 16430780 (-)
ppiab ppia1 coding upstream 371452 16474090 ~ 16479578 (-)
G372162 NA non-coding downstream 4298 16050098 ~ 16096081 (-)
G372148 NA non-coding downstream 40843 16020111 ~ 16059536 (-)
G372160 NA non-coding downstream 57845 16042158 ~ 16042534 (-)
G372156 NA non-coding downstream 66949 16031712 ~ 16033430 (-)
G372155 NA non-coding downstream 68891 16030920 ~ 16031488 (-)
G372239 NA non-coding upstream 82545 16185183 ~ 16185569 (-)
G372250 NA non-coding upstream 96226 16198864 ~ 16199346 (-)
G372263 NA non-coding upstream 103435 16206073 ~ 16206294 (-)
G372264 NA non-coding upstream 103752 16206390 ~ 16206618 (-)
G372267 NA non-coding upstream 105909 16208547 ~ 16208793 (-)
G372123 NA other downstream 119164 15978502 ~ 15981215 (-)
G372122 NA other downstream 124263 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 402050 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 975590 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1105220 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 831597 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1021399 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1386388 17483696 ~ 17521507 (-)
G374189 NA other upstream 1900182 18002820 ~ 18003170 (-)
G374786 NA other upstream 2455502 18558140 ~ 18559167 (-)

Expression


Co-expression Network