Gene
RNA
| Item | Value |
|---|---|
| gene id | G372239 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 16185183 ~ 16185569 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423102 | True | 387 | lncRNA | 0.40 | 1 | 16185183 | 16185569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| garnl3 | LOC106562762 | coding | downstream | 63873 | 15938951 ~ 16121310 (-) |
| LOC110523317 | LOC106568982 | coding | downstream | 258540 | 15902216 ~ 15926643 (-) |
| LOC118964569 | LOC106594099 | coding | downstream | 285889 | 15898677 ~ 15899294 (-) |
| LOC118964568 | LOC106568982 | coding | downstream | 290005 | 15872778 ~ 15895178 (-) |
| c5h9orf78 | cssa01h9orf78 | coding | downstream | 370381 | 15810578 ~ 15814802 (-) |
| LOC118964745 | NA | coding | upstream | 18121 | 16203690 ~ 16205002 (-) |
| si:dkey-34e4.1 | LOC106569177 | coding | upstream | 32745 | 16218314 ~ 16410253 (-) |
| LOC110523325 | LOC106569195 | coding | upstream | 231412 | 16416981 ~ 16422022 (-) |
| LOC110522841 | LOC106569125 | coding | upstream | 241934 | 16427503 ~ 16430780 (-) |
| ppiab | ppia1 | coding | upstream | 288521 | 16474090 ~ 16479578 (-) |
| G372192 | NA | non-coding | downstream | 82545 | 16100379 ~ 16102638 (-) |
| G372162 | NA | non-coding | downstream | 89102 | 16050098 ~ 16096081 (-) |
| G372148 | NA | non-coding | downstream | 125647 | 16020111 ~ 16059536 (-) |
| G372250 | NA | non-coding | upstream | 13295 | 16198864 ~ 16199346 (-) |
| G372263 | NA | non-coding | upstream | 20504 | 16206073 ~ 16206294 (-) |
| G372264 | NA | non-coding | upstream | 20821 | 16206390 ~ 16206618 (-) |
| G372267 | NA | non-coding | upstream | 22978 | 16208547 ~ 16208793 (-) |
| G372123 | NA | other | downstream | 203968 | 15978502 ~ 15981215 (-) |
| G372122 | NA | other | downstream | 209067 | 15975606 ~ 15976116 (-) |
| LOC110523302 | NA | other | downstream | 486854 | 15693396 ~ 15707607 (-) |
| G371294 | LOC106569911 | other | downstream | 1060394 | 15123475 ~ 15124789 (-) |
| LOC110524957 | LOC106569957 | other | downstream | 1190024 | 14988147 ~ 14995197 (-) |
| LOC110523341 | LOC106569324 | other | upstream | 748666 | 16909582 ~ 16942359 (-) |
| G373228 | LOC106569424 | other | upstream | 938468 | 17124037 ~ 17125807 (-) |
| LOC110523354 | LOC106569496 | other | upstream | 1303457 | 17483696 ~ 17521507 (-) |
| G374189 | NA | other | upstream | 1817251 | 18002820 ~ 18003170 (-) |
| G374786 | NA | other | upstream | 2372571 | 18558140 ~ 18559167 (-) |
