G372250


Basic Information

Item Value
gene id G372250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16198864 ~ 16199346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423114
caagacgacagcctggtttgctggttttctcaggGGTCCCTAAAACATTCTcctaacactagctagctggctaatgttagcagaTAACTTGctaatgtcatgtattgtcatgttgtgtcttgtttctgtcctttcccttcaccctgtctccctctgctggtcgttattaggttaccttttctccccctctttcccccagctgttccttgtctcctcctaactacctcgtcaccccttttcccacctgttccctttttccctctgattagtcctctatatctctctctgtttttgtttctgtctttgtcggattcttgtttgtgtttttcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgttttgttattaaagaagctctgtttacgttaattcgcttttgggtcctcattcacgcaccgtaacagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423114 True 483 lncRNA 0.46 1 16198864 16199346

Neighbor

gene id symbol gene type direction distance location
garnl3 LOC106562762 coding downstream 77554 15938951 ~ 16121310 (-)
LOC110523317 LOC106568982 coding downstream 272221 15902216 ~ 15926643 (-)
LOC118964569 LOC106594099 coding downstream 299570 15898677 ~ 15899294 (-)
LOC118964568 LOC106568982 coding downstream 303686 15872778 ~ 15895178 (-)
c5h9orf78 cssa01h9orf78 coding downstream 384062 15810578 ~ 15814802 (-)
LOC118964745 NA coding upstream 4344 16203690 ~ 16205002 (-)
si:dkey-34e4.1 LOC106569177 coding upstream 18968 16218314 ~ 16410253 (-)
LOC110523325 LOC106569195 coding upstream 217635 16416981 ~ 16422022 (-)
LOC110522841 LOC106569125 coding upstream 228157 16427503 ~ 16430780 (-)
ppiab ppia1 coding upstream 274744 16474090 ~ 16479578 (-)
G372239 NA non-coding downstream 13295 16185183 ~ 16185569 (-)
G372192 NA non-coding downstream 96226 16100379 ~ 16102638 (-)
G372162 NA non-coding downstream 102783 16050098 ~ 16096081 (-)
G372160 NA non-coding downstream 156330 16042158 ~ 16042534 (-)
G372156 NA non-coding downstream 165434 16031712 ~ 16033430 (-)
G372263 NA non-coding upstream 6727 16206073 ~ 16206294 (-)
G372264 NA non-coding upstream 7044 16206390 ~ 16206618 (-)
G372267 NA non-coding upstream 9201 16208547 ~ 16208793 (-)
G372704 NA non-coding upstream 36983 16236329 ~ 16236533 (-)
G372123 NA other downstream 217649 15978502 ~ 15981215 (-)
G372122 NA other downstream 222748 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 500535 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1074075 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1203705 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 734889 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 924691 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1289680 17483696 ~ 17521507 (-)
G374189 NA other upstream 1803474 18002820 ~ 18003170 (-)
G374786 NA other upstream 2358794 18558140 ~ 18559167 (-)

Expression


Co-expression Network