G372270


Basic Information

Item Value
gene id G372270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16211123 ~ 16211413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423135
GACCTATTAAAGTGCAGCGGTGCATTTTGAACCCACAACCCAACCCCTCCCTGTTTTTCAATTGGTTGTTCAGTACAGCACCGTTTCCCATTTAAACACAGACTACTGTATACACATCTCAAGGAACCATGGAACCTTGCTGATTACAAGGCAATGCATTTGTTTCTGTTGACTGTTGGTCttattcagtggtgtaaagtacttcagtaaaaatgcttgaaagtactacttaagtagttttgtggggtatctttactttactatttatattttgacaacttttactttact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423135 True 291 lncRNA 0.37 1 16211123 16211413

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 352763 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 371664 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 379382 15829533 ~ 15831741 (+)
med22 med22 coding upstream 400621 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 420095 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 222850 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 243182 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 305387 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 479492 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 500769 16712182 ~ 16726009 (+)
G372255 NA non-coding upstream 9977 16200783 ~ 16201146 (+)
G371818 NA non-coding upstream 45319 16161694 ~ 16165804 (+)
G371819 NA non-coding upstream 46129 16163837 ~ 16164994 (+)
G371748 NA non-coding upstream 150700 16060013 ~ 16060423 (+)
G371743 NA non-coding upstream 156080 16054598 ~ 16055043 (+)
G372279 NA non-coding downstream 5259 16216672 ~ 16216871 (+)
G372281 LOC106569177 non-coding downstream 6915 16218328 ~ 16220933 (+)
G372288 NA non-coding downstream 35870 16247283 ~ 16247571 (+)
G372304 NA non-coding downstream 71744 16283157 ~ 16302922 (+)
G372329 NA non-coding downstream 117995 16329408 ~ 16329658 (+)
G371615 LOC100194725 other upstream 416001 15791559 ~ 15795122 (+)
G371182 NA other upstream 1082306 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1157567 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1405652 14798616 ~ 14805526 (+)
G370414 NA other upstream 1842962 14367672 ~ 14368161 (+)
G372373 NA other downstream 524229 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 659021 16870434 ~ 16882185 (+)
G373726 NA other downstream 1492700 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1856030 18067350 ~ 18177035 (+)

Expression


Co-expression Network