Gene
RNA
| Item | Value |
|---|---|
| gene id | G372279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 16216672 ~ 16216871 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423144 | True | 200 | lncRNA | 0.39 | 1 | 16216672 | 16216871 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptges | ptges | coding | upstream | 358312 | 15852569 ~ 15858360 (+) |
| usp20 | LOC106569850 | coding | upstream | 377213 | 15816800 ~ 15839459 (+) |
| LOC118964570 | NA | coding | upstream | 384931 | 15829533 ~ 15831741 (+) |
| med22 | med22 | coding | upstream | 406170 | 15796177 ~ 15810502 (+) |
| LOC110523312 | surf1 | coding | upstream | 425644 | 15788795 ~ 15791028 (+) |
| LOC110523326 | dusp26 | coding | downstream | 217392 | 16434263 ~ 16437732 (+) |
| LOC110523327 | LOC105015301 | coding | downstream | 237724 | 16454595 ~ 16470342 (+) |
| pargl | LOC106569224 | coding | downstream | 299929 | 16516800 ~ 16557705 (+) |
| LOC110523336 | NA | coding | downstream | 474034 | 16690905 ~ 16694551 (+) |
| polm | LOC106569276 | coding | downstream | 495311 | 16712182 ~ 16726009 (+) |
| G372270 | NA | non-coding | upstream | 5259 | 16211123 ~ 16211413 (+) |
| G372255 | NA | non-coding | upstream | 15526 | 16200783 ~ 16201146 (+) |
| G371818 | NA | non-coding | upstream | 50868 | 16161694 ~ 16165804 (+) |
| G371819 | NA | non-coding | upstream | 51678 | 16163837 ~ 16164994 (+) |
| G371748 | NA | non-coding | upstream | 156249 | 16060013 ~ 16060423 (+) |
| G372281 | LOC106569177 | non-coding | downstream | 1457 | 16218328 ~ 16220933 (+) |
| G372288 | NA | non-coding | downstream | 30412 | 16247283 ~ 16247571 (+) |
| G372304 | NA | non-coding | downstream | 66286 | 16283157 ~ 16302922 (+) |
| G372329 | NA | non-coding | downstream | 112537 | 16329408 ~ 16329658 (+) |
| G372331 | NA | non-coding | downstream | 114220 | 16331091 ~ 16331347 (+) |
| G371615 | LOC100194725 | other | upstream | 421550 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 1087855 | 15124290 ~ 15128817 (+) |
| LOC110519479 | LOC106596183 | other | upstream | 1163116 | 15047739 ~ 15054353 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 1411201 | 14798616 ~ 14805526 (+) |
| G370414 | NA | other | upstream | 1848511 | 14367672 ~ 14368161 (+) |
| G372373 | NA | other | downstream | 518771 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 653563 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 1487242 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 1850572 | 18067350 ~ 18177035 (+) |
