G372329


Basic Information

Item Value
gene id G372329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16329408 ~ 16329658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423199
GTATGTATAGGgttaaggtgactaggcaacaggatctaagataaacagagtagcagcagcttgcagGTGAGTGGGTGTGcgggtgtgtagagtcagtataaatgtatgtgcatattatgtgtgagtgcAGATGAtggagtgagagtgagtgtgtagaACCTTGTGAGTGCAGATGatggagtgagagtgagtgagtgtgtagaaCCTTGTGAGTGCAGATGatggagtgagtgagagtgagtgtgtagaAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423199 True 251 lncRNA 0.46 1 16329408 16329658

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 471048 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 489949 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 497667 15829533 ~ 15831741 (+)
med22 med22 coding upstream 518906 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 538380 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 104605 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 124937 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 187142 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 361247 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 382524 16712182 ~ 16726009 (+)
G372304 NA non-coding upstream 26486 16283157 ~ 16302922 (+)
G372288 NA non-coding upstream 81837 16247283 ~ 16247571 (+)
G372281 LOC106569177 non-coding upstream 108759 16218328 ~ 16220933 (+)
G372279 NA non-coding upstream 112537 16216672 ~ 16216871 (+)
G372270 NA non-coding upstream 117995 16211123 ~ 16211413 (+)
G372331 NA non-coding downstream 1433 16331091 ~ 16331347 (+)
G372333 NA non-coding downstream 5527 16335185 ~ 16335553 (+)
G372342 NA non-coding downstream 23366 16353024 ~ 16353240 (+)
G372345 NA non-coding downstream 25434 16355092 ~ 16355312 (+)
G372380 NA non-coding downstream 71474 16401132 ~ 16475585 (+)
G371615 LOC100194725 other upstream 534286 15791559 ~ 15795122 (+)
G371182 NA other upstream 1200591 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1275852 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1523937 14798616 ~ 14805526 (+)
G372373 NA other downstream 405984 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 540776 16870434 ~ 16882185 (+)
G373726 NA other downstream 1374455 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1737785 18067350 ~ 18177035 (+)
G376320 NA other downstream 3653603 19983261 ~ 19983848 (+)

Expression


Co-expression Network