G372333


Basic Information

Item Value
gene id G372333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16335185 ~ 16335553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423203
CGGTGGACTGTCAAGTGTTGTCGTTTAGACTGCAGTGGACTGTCAGTGTTGTGGTGTAGACTGCAGTGGACTGTCAGTGTTGTGGTGTAGACTGCAGTGGACTGTCAGTGTTGTAGTTTAGACTGCAGTGGACTGTCAGTGTTGTGGTGTAGACTGCAGTGGACTGTCAGTGTTGTAGTTTAGACTGCAGTGGACTGTCAGTGTTGTGGTTTAGACTGCAGTGGACTGTCAGTGTTGTAGTTTAGACTGTAGTGGACTGTCCGTGTTGTAGTTTAGACTGCGGTGGACTGTCAAGTGTTGTCGTTTAGACTGCAGTGGACTGTCAGTGTTGTGGTTTAGACTGTGGTGGACTGTCAGTGTTGTGGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423203 True 369 lncRNA 0.48 1 16335185 16335553

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 476825 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 495726 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 503444 15829533 ~ 15831741 (+)
med22 med22 coding upstream 524683 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 544157 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 98710 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 119042 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 181247 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 355352 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 376629 16712182 ~ 16726009 (+)
G372331 NA non-coding upstream 3838 16331091 ~ 16331347 (+)
G372329 NA non-coding upstream 5527 16329408 ~ 16329658 (+)
G372304 NA non-coding upstream 32263 16283157 ~ 16302922 (+)
G372288 NA non-coding upstream 87614 16247283 ~ 16247571 (+)
G372281 LOC106569177 non-coding upstream 114536 16218328 ~ 16220933 (+)
G372342 NA non-coding downstream 17471 16353024 ~ 16353240 (+)
G372345 NA non-coding downstream 19539 16355092 ~ 16355312 (+)
G372380 NA non-coding downstream 65579 16401132 ~ 16475585 (+)
G372374 NA non-coding downstream 140973 16476526 ~ 16479402 (+)
G372381 NA non-coding downstream 223103 16558656 ~ 16559057 (+)
G371615 LOC100194725 other upstream 540063 15791559 ~ 15795122 (+)
G371182 NA other upstream 1206368 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1281629 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1529714 14798616 ~ 14805526 (+)
G372373 NA other downstream 400089 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 534881 16870434 ~ 16882185 (+)
G373726 NA other downstream 1368560 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1731890 18067350 ~ 18177035 (+)
G376320 NA other downstream 3647708 19983261 ~ 19983848 (+)

Expression


Co-expression Network