G372342


Basic Information

Item Value
gene id G372342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16353024 ~ 16353240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423212
tcatagatatcatcctaaccaacttgccctctaaatacacctctgctgtcttcaaccaagatctcagcgatcactgcctcattgcctgcatccgtaatgggtcagcggtcaaacgacctccactcatcactgtcaaacgctccctgaaacacttcagtgagcaggcctttctaatcgacctggccggggtatcctggaaggatattgatctcatccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423212 True 217 lncRNA 0.50 1 16353024 16353240

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 494664 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 513565 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 521283 15829533 ~ 15831741 (+)
med22 med22 coding upstream 542522 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 561996 15788795 ~ 15791028 (+)
LOC110523326 dusp26 coding downstream 81023 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 101355 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 163560 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 337665 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 358942 16712182 ~ 16726009 (+)
G372333 NA non-coding upstream 17471 16335185 ~ 16335553 (+)
G372331 NA non-coding upstream 21677 16331091 ~ 16331347 (+)
G372329 NA non-coding upstream 23366 16329408 ~ 16329658 (+)
G372304 NA non-coding upstream 50102 16283157 ~ 16302922 (+)
G372288 NA non-coding upstream 105453 16247283 ~ 16247571 (+)
G372345 NA non-coding downstream 1852 16355092 ~ 16355312 (+)
G372380 NA non-coding downstream 47892 16401132 ~ 16475585 (+)
G372374 NA non-coding downstream 123286 16476526 ~ 16479402 (+)
G372381 NA non-coding downstream 205416 16558656 ~ 16559057 (+)
G372480 NA non-coding downstream 219604 16572844 ~ 16573465 (+)
G372281 LOC106569177 other upstream 132091 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 557902 15791559 ~ 15795122 (+)
G371182 NA other upstream 1224207 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1299468 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1547553 14798616 ~ 14805526 (+)
G372373 NA other downstream 382402 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 517194 16870434 ~ 16882185 (+)
G373726 NA other downstream 1350873 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1714203 18067350 ~ 18177035 (+)
G376320 NA other downstream 3630021 19983261 ~ 19983848 (+)

Expression


Co-expression Network