G372816


Basic Information

Item Value
gene id G372816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16436012 ~ 16437300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423845
GAGTCAGAAATTTATTTGGGAACAGACAAggaaacaagacaggaacagcatcAGGACACGGGTAAAACGGACATGAGACAATTAATCCcaaagcagggaacagagcttgggaacagacagatatagggaaggtaatgacacaagtaattgagTCCACGTGAGTCCAATGATCGCTGATGCATGTTAcggggggaaggcaggtgtgcgtactgaTGGTGGCTTGAGTGCGTAATGCACTcaccgagaacaccatccccagcatgatgttttttatcagtagggactgggaaactggtcagaattgaaggaatgatggatggtgctaaaaacagggaaattcttgagggaaacctgtttcagtcttccagagatttgagactgggacggaggttcaccttccagcaggacaatgatactaagcatactgctaaagcaacactcgagtggtttaaggggaaacatataaatgtcttggaatggccattTGGGAATGATATGATTGTACATGTCATCaaaatgtctccatgtctctactGCACTGTATAGGTTGAAGTTACGTCTAtataaggcatgatttatatccCTTTGATACTTAATTCTACCATATAGTTAGTACTGTATAACTGACCACAATACCTGGGATTGTTAGTCAAGACCCAGGCGCTTTTATCCAAAGATAAAAAGGGAAACAGACAACGATTGTCACACGACCACACAGCAGGAAAGAAATTCTGCCTGACGTTTGAATTATATCAATTTCTGGTTGTAAACTGTTTTTCTGGTTTTGAAGATGTCATAAAACCAGATTCCGACCAATTGGTCTCTGTTTCAACCAGGTAAAGACGCCTTTTTCATGACGAGATCAAGACATGGGAAAGACAATGACACCCGTTGCTGATGTATTTTTCTGGTTTAAAAAATGGTTTACCCTGGTTAACCCAGGTTTTGTAGATGGGTTAGCATTGTTACAACTCTAAAGTAGTGTATTTAGCTGTGTTAGCCTGTTAGCTCTaaagagaggttggagaggttggagaggttgGGGAGGTTGGGGAGtgtagagccttgcggttgtcCCGGAGGATGCTGTCCAGGCCGTTGAGCTGGCGTAGGAAGCCCCGGTTGGGGATTACGCCACGGTGGTCCTTCACTGCCTTGATGGCATCCACCAGGGTCAGGTTCTGACGGATCATCAGGTAGGCCAGAACCAGCGTGGCCGAACGACTCACACCCACCGCACAGTGCACCAGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423845 True 1253 lncRNA 0.45 2 16436012 16437300

Neighbor

gene id symbol gene type direction distance location
LOC110522841 LOC106569125 coding downstream 5232 16427503 ~ 16430780 (-)
LOC110523325 LOC106569195 coding downstream 13990 16416981 ~ 16422022 (-)
si:dkey-34e4.1 LOC106569177 coding downstream 25759 16218314 ~ 16410253 (-)
LOC118964745 NA coding downstream 231010 16203690 ~ 16205002 (-)
garnl3 LOC106562762 coding downstream 314702 15938951 ~ 16121310 (-)
ppiab ppia1 coding upstream 36790 16474090 ~ 16479578 (-)
LOC118964764 NA coding upstream 37897 16475197 ~ 16475278 (-)
LOC118964765 NA coding upstream 38477 16475777 ~ 16475856 (-)
LOC118964763 NA coding upstream 39379 16476679 ~ 16476760 (-)
zmiz2 zmiz2 coding upstream 42848 16480148 ~ 16516827 (-)
G372773 NA non-coding downstream 71162 16364644 ~ 16364850 (-)
G372772 NA non-coding downstream 71918 16363875 ~ 16364094 (-)
G372761 NA non-coding downstream 92863 16342844 ~ 16343149 (-)
G372760 NA non-coding downstream 94308 16341502 ~ 16341704 (-)
G372758 NA non-coding downstream 95893 16339767 ~ 16340119 (-)
G372876 NA non-coding upstream 141779 16579079 ~ 16579741 (-)
G372892 NA non-coding upstream 186795 16624095 ~ 16624702 (-)
G372901 NA non-coding upstream 207929 16645229 ~ 16646216 (-)
G372909 NA non-coding upstream 226345 16663645 ~ 16664178 (-)
G372929 NA non-coding upstream 260047 16697347 ~ 16700089 (-)
G372123 NA other downstream 454797 15978502 ~ 15981215 (-)
G372122 NA other downstream 459896 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 737683 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1311223 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1440853 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 496935 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 686737 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1051726 17483696 ~ 17521507 (-)
G374189 NA other upstream 1565520 18002820 ~ 18003170 (-)
G374786 NA other upstream 2120840 18558140 ~ 18559167 (-)

Expression


Co-expression Network