Gene
RNA
| Item | Value |
|---|---|
| gene id | G372374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 16476526 ~ 16479402 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 2-peptidylprolyl isomerase A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423246 | True | 472 | lncRNA | 0.48 | 2 | 16476526 | 16479402 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523327 | LOC105015301 | coding | upstream | 6184 | 16454595 ~ 16470342 (+) |
| LOC110523326 | dusp26 | coding | upstream | 38794 | 16434263 ~ 16437732 (+) |
| ptges | ptges | coding | upstream | 618166 | 15852569 ~ 15858360 (+) |
| usp20 | LOC106569850 | coding | upstream | 637067 | 15816800 ~ 15839459 (+) |
| LOC118964570 | NA | coding | upstream | 644785 | 15829533 ~ 15831741 (+) |
| pargl | LOC106569224 | coding | downstream | 37398 | 16516800 ~ 16557705 (+) |
| LOC110523336 | NA | coding | downstream | 211503 | 16690905 ~ 16694551 (+) |
| polm | LOC106569276 | coding | downstream | 232780 | 16712182 ~ 16726009 (+) |
| ved | LOC106569620 | coding | downstream | 253234 | 16732636 ~ 16735129 (+) |
| purbb | LOC106562912 | coding | downstream | 261951 | 16741353 ~ 16744067 (+) |
| G372380 | NA | non-coding | upstream | 941 | 16401132 ~ 16475585 (+) |
| G372345 | NA | non-coding | upstream | 121214 | 16355092 ~ 16355312 (+) |
| G372342 | NA | non-coding | upstream | 123286 | 16353024 ~ 16353240 (+) |
| G372333 | NA | non-coding | upstream | 140973 | 16335185 ~ 16335553 (+) |
| G372331 | NA | non-coding | upstream | 145179 | 16331091 ~ 16331347 (+) |
| G372381 | NA | non-coding | downstream | 79254 | 16558656 ~ 16559057 (+) |
| G372480 | NA | non-coding | downstream | 93442 | 16572844 ~ 16573465 (+) |
| G372505 | NA | non-coding | downstream | 127930 | 16607332 ~ 16607737 (+) |
| G372506 | NA | non-coding | downstream | 130100 | 16609502 ~ 16609777 (+) |
| G372507 | LOC106569240 | non-coding | downstream | 130494 | 16609896 ~ 16662496 (+) |
| G372281 | LOC106569177 | other | upstream | 255593 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 681404 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 1347709 | 15124290 ~ 15128817 (+) |
| LOC110519479 | LOC106596183 | other | upstream | 1422970 | 15047739 ~ 15054353 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 1671055 | 14798616 ~ 14805526 (+) |
| G372373 | NA | other | downstream | 256240 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 391032 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 1224711 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 1588041 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 3503859 | 19983261 ~ 19983848 (+) |
