G372480


Basic Information

Item Value
gene id G372480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16572844 ~ 16573465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423361
AGGAGAGTTTTCACATTGTGTCACCGGGAgagtttccacattgtgttaccaGGAGAGTTTCCACATTGTGTCACCAGGAGAGTTTCCACattgtgttaccaGGAGAGTTTCCACATTGTGTCACCAGggctaacaggtctgtgagagccggaattacTGGTTTgttggtgatcaaatacttatgtcatgcaataaaatgcaaattaattacttaaaaatcatacaatgtgattttatggattttgttttagattccgtctcacacagttgaagtgtacctatgataaaaaatgacagacctctacatcctttgaaagtaggaaaacctgcaaaatcggcagtgtatcaaatacttgttctccccactgtatatactgtactctataccatctactgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423361 True 397 lncRNA 0.39 2 16572844 16573465

Neighbor

gene id symbol gene type direction distance location
pargl LOC106569224 coding upstream 15139 16516800 ~ 16557705 (+)
LOC110523327 LOC105015301 coding upstream 102502 16454595 ~ 16470342 (+)
LOC110523326 dusp26 coding upstream 135112 16434263 ~ 16437732 (+)
ptges ptges coding upstream 714484 15852569 ~ 15858360 (+)
LOC118964570 NA coding upstream 741103 15829533 ~ 15831741 (+)
LOC110523336 NA coding downstream 117440 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 138717 16712182 ~ 16726009 (+)
ved LOC106569620 coding downstream 159171 16732636 ~ 16735129 (+)
purbb LOC106562912 coding downstream 167888 16741353 ~ 16744067 (+)
LOC110523342 LOC106569363 coding downstream 375937 16949402 ~ 16967809 (+)
G372381 NA non-coding upstream 13787 16558656 ~ 16559057 (+)
G372374 NA non-coding upstream 93442 16476526 ~ 16479402 (+)
G372380 NA non-coding upstream 97259 16401132 ~ 16475585 (+)
G372345 NA non-coding upstream 217532 16355092 ~ 16355312 (+)
G372342 NA non-coding upstream 219604 16353024 ~ 16353240 (+)
G372505 NA non-coding downstream 33867 16607332 ~ 16607737 (+)
G372506 NA non-coding downstream 36037 16609502 ~ 16609777 (+)
G372507 LOC106569240 non-coding downstream 36431 16609896 ~ 16662496 (+)
G372513 NA non-coding downstream 50671 16624136 ~ 16688985 (+)
G372518 NA non-coding downstream 63838 16637303 ~ 16639895 (+)
G372281 LOC106569177 other upstream 351911 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 777722 15791559 ~ 15795122 (+)
G371182 NA other upstream 1444027 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1519288 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1767373 14798616 ~ 14805526 (+)
G372373 NA other downstream 162177 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 296969 16870434 ~ 16882185 (+)
G373726 NA other downstream 1130648 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1493978 18067350 ~ 18177035 (+)
G376320 NA other downstream 3409796 19983261 ~ 19983848 (+)

Expression


Co-expression Network