G372876


Basic Information

Item Value
gene id G372876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16579079 ~ 16579741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423913
GTCATAACGCTGCGCTACAGTCATAACATTACGCTACAGTCATAACGCTACGCTACAGTCATAACATTACGCTACAGTCATACCGTTACGCTACAGTCATAACGTTACGCTACAGTCATAACGTTACGCTACAGTCATAACGTTACGCTACAGTAAAAGCGCTACTCTACAGTCATAACATTACGCTACAGTCATAACGTTACTCTACAGTAAAAGCGCTACTCTACAGTCATAACATTACGCTGCAGTCATAACATTACGCTACAGTCATAATGTTACACTACAGTAAAAGCGCTACTCTACAGTCATAACATTACGCTACAGTCATAACATTACGCTACAGTCGGAATGCTACAGTCATAATGTTACACTACAGTCATAACGTTACGCTACAGTCATAATGTTACACCACAGTCATAACATTACGCTACAGTCATAACACTACACTATGGTCATAATGCTACAGTCATAACGTTATGCTACAGTAATAGCGCTACACTACAGTCATGACATTACACTACAGTCATAACGTTACGCTACAGTAATAGCGCTACACTACTGTCATAGCATTACGCTGCAATCATAGCTCTACGCTTCAGTCATAACATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423913 True 611 lncRNA 0.40 2 16579079 16579741

Neighbor

gene id symbol gene type direction distance location
zmiz2 zmiz2 coding downstream 62252 16480148 ~ 16516827 (-)
ppiab ppia1 coding downstream 99501 16474090 ~ 16479578 (-)
LOC118964763 NA coding downstream 102319 16476679 ~ 16476760 (-)
LOC118964765 NA coding downstream 103223 16475777 ~ 16475856 (-)
LOC118964764 NA coding downstream 103801 16475197 ~ 16475278 (-)
LOC110523332 LOC106569240 coding upstream 34884 16614625 ~ 16678865 (-)
nudcd3 LOC106569287 coding upstream 101143 16680884 ~ 16690718 (-)
gnsb gns coding upstream 112829 16692570 ~ 16711872 (-)
LOC110523337 LOC105007341 coding upstream 155899 16735640 ~ 16738410 (-)
il1b NA coding upstream 175152 16754893 ~ 16757068 (-)
G372816 NA non-coding downstream 141779 16436012 ~ 16437300 (-)
G372773 NA non-coding downstream 214229 16364644 ~ 16364850 (-)
G372772 NA non-coding downstream 214985 16363875 ~ 16364094 (-)
G372761 NA non-coding downstream 235930 16342844 ~ 16343149 (-)
G372760 NA non-coding downstream 237375 16341502 ~ 16341704 (-)
G372892 NA non-coding upstream 44354 16624095 ~ 16624702 (-)
G372901 NA non-coding upstream 65488 16645229 ~ 16646216 (-)
G372909 NA non-coding upstream 83904 16663645 ~ 16664178 (-)
G372929 NA non-coding upstream 117606 16697347 ~ 16700089 (-)
LOC118964572 LOC106569151 non-coding upstream 213278 16792247 ~ 16869454 (-)
G372123 NA other downstream 597864 15978502 ~ 15981215 (-)
G372122 NA other downstream 602963 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 880750 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1454290 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1583920 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 354494 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 544296 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 909285 17483696 ~ 17521507 (-)
G374189 NA other upstream 1423079 18002820 ~ 18003170 (-)
G374786 NA other upstream 1978399 18558140 ~ 18559167 (-)

Expression


Co-expression Network