G372505


Basic Information

Item Value
gene id G372505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16607332 ~ 16607737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423386
gtgcacaattgagagcatcctgtcgggctgtatcactgcctggtacggcaactgcaccgcccacaactgcagggctctccagagggtggtgcggtctgcacaatgcatcacagggggcaaactacctgccctccaggtcacctacaacacccaatgtcacaggaaggcaaaaaagataatcaaggacaataaccacctaagccactacctgttcaccccgcttccatccagaaggcgaggtcagtataggtgcaaaaaagctgggacagagagattgaaaaacagcttctatctcaaggccatcagattgttaaacagccaccactagcacagagaggctgctgcctacctacagacttgatatcattggccactttaataaatggaacaccagTCACTTCAATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423386 True 406 lncRNA 0.50 1 16607332 16607737

Neighbor

gene id symbol gene type direction distance location
pargl LOC106569224 coding upstream 49627 16516800 ~ 16557705 (+)
LOC110523327 LOC105015301 coding upstream 136990 16454595 ~ 16470342 (+)
LOC110523326 dusp26 coding upstream 169600 16434263 ~ 16437732 (+)
ptges ptges coding upstream 748972 15852569 ~ 15858360 (+)
LOC118964570 NA coding upstream 775591 15829533 ~ 15831741 (+)
LOC110523336 NA coding downstream 83168 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 104445 16712182 ~ 16726009 (+)
ved LOC106569620 coding downstream 124899 16732636 ~ 16735129 (+)
purbb LOC106562912 coding downstream 133616 16741353 ~ 16744067 (+)
LOC110523342 LOC106569363 coding downstream 341665 16949402 ~ 16967809 (+)
G372480 NA non-coding upstream 33867 16572844 ~ 16573465 (+)
G372381 NA non-coding upstream 48275 16558656 ~ 16559057 (+)
G372374 NA non-coding upstream 127930 16476526 ~ 16479402 (+)
G372380 NA non-coding upstream 131747 16401132 ~ 16475585 (+)
G372345 NA non-coding upstream 252020 16355092 ~ 16355312 (+)
G372506 NA non-coding downstream 1765 16609502 ~ 16609777 (+)
G372507 LOC106569240 non-coding downstream 2159 16609896 ~ 16662496 (+)
G372513 NA non-coding downstream 16399 16624136 ~ 16688985 (+)
G372518 NA non-coding downstream 29566 16637303 ~ 16639895 (+)
G372281 LOC106569177 other upstream 386399 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 812210 15791559 ~ 15795122 (+)
G371182 NA other upstream 1478515 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1553776 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1801861 14798616 ~ 14805526 (+)
G372373 NA other downstream 127905 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 262697 16870434 ~ 16882185 (+)
G373726 NA other downstream 1096376 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1459706 18067350 ~ 18177035 (+)
G376320 NA other downstream 3375524 19983261 ~ 19983848 (+)

Expression


Co-expression Network