G372892


Basic Information

Item Value
gene id G372892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16624095 ~ 16624702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423929
gtcctgggcagttgtggttacacgtggtctgcggttgtgaggccggttggatgtactgccaaattctctaaaacagagttggaggcggcttatggtagagaaattaacataaaattatctggccACAGCTCTGGTGGAGATTCCTACAGTCAACATGCCATTTGCGCGCTACCTCAAACCTTGTGAcattgttttgtgtgacaaaactgcacattttagcgttgccttttattgtcgccagcacaaggtgaacctgtgtaatgataatgctGCTTAATCAGCttcttatttatttacttttctgctcttttgcacaccagtatctctacctgcacatgaccatctgatcatttatcactccagtgttaatctgctaaaattgtaattattcgcccacctcctcatgccttttgcacacaatgtctatagactccttttttctttttttctactgtgttattgacttgtttattgtttactccatgtgtaactctgtgttgctgtctgttcacactgctatgctttatcttggccaggttgcagttgtaaatgagaacttgttctcaactagcctacct

Function

NR:

description
hypothetical protein EH28_23780

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423929 True 578 lncRNA 0.42 2 16624095 16624702

Neighbor

gene id symbol gene type direction distance location
ogdhb ogdh coding downstream 21162 16559410 ~ 16602933 (-)
zmiz2 zmiz2 coding downstream 107268 16480148 ~ 16516827 (-)
ppiab ppia1 coding downstream 144517 16474090 ~ 16479578 (-)
nudcd3 LOC106569287 coding upstream 56182 16680884 ~ 16690718 (-)
gnsb gns coding upstream 67868 16692570 ~ 16711872 (-)
LOC110523337 LOC105007341 coding upstream 110938 16735640 ~ 16738410 (-)
il1b NA coding upstream 130191 16754893 ~ 16757068 (-)
LOC110523339 LOC106569301 coding upstream 146695 16771397 ~ 16785517 (-)
G372876 NA non-coding downstream 44354 16579079 ~ 16579741 (-)
G372816 NA non-coding downstream 186795 16436012 ~ 16437300 (-)
G372773 NA non-coding downstream 259245 16364644 ~ 16364850 (-)
G372772 NA non-coding downstream 260001 16363875 ~ 16364094 (-)
G372761 NA non-coding downstream 280946 16342844 ~ 16343149 (-)
G372901 NA non-coding upstream 20527 16645229 ~ 16646216 (-)
G372909 NA non-coding upstream 38943 16663645 ~ 16664178 (-)
G372929 NA non-coding upstream 72645 16697347 ~ 16700089 (-)
LOC118964572 LOC106569151 non-coding upstream 168317 16792247 ~ 16869454 (-)
G372971 NA non-coding upstream 170003 16794705 ~ 16796350 (-)
G372123 NA other downstream 642880 15978502 ~ 15981215 (-)
G372122 NA other downstream 647979 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 925766 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1499306 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1628936 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 309533 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 499335 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 864324 17483696 ~ 17521507 (-)
G374189 NA other upstream 1378118 18002820 ~ 18003170 (-)
G374786 NA other upstream 1933438 18558140 ~ 18559167 (-)

Expression


Co-expression Network