G372901


Basic Information

Item Value
gene id G372901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16645229 ~ 16646216 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423942
ctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctgtttAAGGggttgttgttgtgctggactgttgtctgggtctgtg
>TU423943
ggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctggggttgttgttgtggtggactgttgtctgggtctggttaaggggttgttgttgtgctggactgttgtctgggtctgtttAAGGggttgttgttgtgctggactgttgtctgggtctgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423942 False 415 lncRNA 0.51 2 16645229 16646216
TU423943 True 366 lncRNA 0.51 2 16645229 16645764

Neighbor

gene id symbol gene type direction distance location
ogdhb ogdh coding downstream 42296 16559410 ~ 16602933 (-)
zmiz2 zmiz2 coding downstream 128402 16480148 ~ 16516827 (-)
LOC118964763 NA coding downstream 168469 16476679 ~ 16476760 (-)
LOC118964765 NA coding downstream 169373 16475777 ~ 16475856 (-)
LOC118964764 NA coding downstream 169951 16475197 ~ 16475278 (-)
nudcd3 LOC106569287 coding upstream 34668 16680884 ~ 16690718 (-)
gnsb gns coding upstream 46354 16692570 ~ 16711872 (-)
LOC110523337 LOC105007341 coding upstream 89424 16735640 ~ 16738410 (-)
il1b NA coding upstream 108677 16754893 ~ 16757068 (-)
LOC110523339 LOC106569301 coding upstream 125181 16771397 ~ 16785517 (-)
G372892 NA non-coding downstream 20527 16624095 ~ 16624702 (-)
G372876 NA non-coding downstream 65488 16579079 ~ 16579741 (-)
G372816 NA non-coding downstream 207929 16436012 ~ 16437300 (-)
G372773 NA non-coding downstream 280379 16364644 ~ 16364850 (-)
G372772 NA non-coding downstream 281135 16363875 ~ 16364094 (-)
G372909 NA non-coding upstream 17429 16663645 ~ 16664178 (-)
G372929 NA non-coding upstream 51131 16697347 ~ 16700089 (-)
LOC118964572 LOC106569151 non-coding upstream 146803 16792247 ~ 16869454 (-)
G372971 NA non-coding upstream 148489 16794705 ~ 16796350 (-)
G372974 NA non-coding upstream 163972 16810188 ~ 16811597 (-)
G372123 NA other downstream 664014 15978502 ~ 15981215 (-)
G372122 NA other downstream 669113 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 946900 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1520440 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1650070 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 288019 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 477821 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 842810 17483696 ~ 17521507 (-)
G374189 NA other upstream 1356604 18002820 ~ 18003170 (-)
G374786 NA other upstream 1911924 18558140 ~ 18559167 (-)

Expression


Co-expression Network