Gene
RNA
| Item | Value |
|---|---|
| gene id | G372597 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 16823028 ~ 16823918 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| S-antigen protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423578 | True | 695 | lncRNA | 0.45 | 2 | 16823028 | 16823918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| purbb | LOC106562912 | coding | upstream | 78961 | 16741353 ~ 16744067 (+) |
| ved | LOC106569620 | coding | upstream | 87899 | 16732636 ~ 16735129 (+) |
| polm | LOC106569276 | coding | upstream | 97019 | 16712182 ~ 16726009 (+) |
| LOC110523336 | NA | coding | upstream | 129598 | 16690905 ~ 16694551 (+) |
| pargl | LOC106569224 | coding | upstream | 265323 | 16516800 ~ 16557705 (+) |
| LOC110523342 | LOC106569363 | coding | downstream | 125484 | 16949402 ~ 16967809 (+) |
| st8sia5 | st8sia5 | coding | downstream | 171476 | 16995394 ~ 17012011 (+) |
| LOC110522812 | loxhd1 | coding | downstream | 195669 | 17019587 ~ 17071539 (+) |
| atp5fa1 | LOC106569424 | coding | downstream | 295869 | 17119787 ~ 17125777 (+) |
| LOC100136246 | LOC106569430 | coding | downstream | 302438 | 17126356 ~ 17147778 (+) |
| G372589 | NA | non-coding | upstream | 12842 | 16809931 ~ 16810186 (+) |
| G372570 | NA | non-coding | upstream | 49500 | 16771410 ~ 16773528 (+) |
| G372560 | NA | non-coding | upstream | 70761 | 16751244 ~ 16752267 (+) |
| G372373 | NA | non-coding | upstream | 84808 | 16735642 ~ 16738500 (+) |
| G372599 | NA | non-coding | downstream | 3074 | 16826992 ~ 16827246 (+) |
| G372601 | NA | non-coding | downstream | 4496 | 16828414 ~ 16829061 (+) |
| G372602 | NA | non-coding | downstream | 5823 | 16829741 ~ 16830059 (+) |
| G372603 | NA | non-coding | downstream | 6731 | 16830649 ~ 16830900 (+) |
| G372605 | NA | non-coding | downstream | 15308 | 16839226 ~ 16839431 (+) |
| G372281 | LOC106569177 | other | upstream | 602095 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1027906 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 1694211 | 15124290 ~ 15128817 (+) |
| LOC110519479 | LOC106596183 | other | upstream | 1769472 | 15047739 ~ 15054353 (+) |
| G372618 | LOC105030512 | other | downstream | 46516 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 880195 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 1243525 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 3159343 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3767562 | 20591480 ~ 20596863 (+) |
