G372605


Basic Information

Item Value
gene id G372605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16839226 ~ 16839431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423586
gctctcatgcatgcctcagtgttgcttgcctcgaagcgagcatagaagtgatttagctcatctggtaggctcgtgtcactgcgcagctcgcggctgtgcttccctttgtagtccgtaatagtttgcaagccctgccacataagacgagcgtcagagccggtgtagtatgattcaatcttagccctgtattgacgctttgcctgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423586 True 206 lncRNA 0.51 1 16839226 16839431

Neighbor

gene id symbol gene type direction distance location
purbb LOC106562912 coding upstream 95159 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 104097 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 113217 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 145796 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 281521 16516800 ~ 16557705 (+)
LOC110523342 LOC106569363 coding downstream 109971 16949402 ~ 16967809 (+)
st8sia5 st8sia5 coding downstream 155963 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 180156 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 280356 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 286925 17126356 ~ 17147778 (+)
G372603 NA non-coding upstream 8326 16830649 ~ 16830900 (+)
G372602 NA non-coding upstream 9167 16829741 ~ 16830059 (+)
G372601 NA non-coding upstream 10165 16828414 ~ 16829061 (+)
G372599 NA non-coding upstream 11980 16826992 ~ 16827246 (+)
G372597 NA non-coding upstream 15308 16823028 ~ 16823918 (+)
G372606 NA non-coding downstream 1058 16840489 ~ 16841034 (+)
G372610 NA non-coding downstream 14798 16854229 ~ 16854450 (+)
G372612 NA non-coding downstream 15698 16855129 ~ 16855483 (+)
G372617 NA non-coding downstream 26839 16866270 ~ 16866504 (+)
G372621 LOC106569151 non-coding downstream 29239 16868670 ~ 16869064 (+)
G372373 NA other upstream 100726 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 618293 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1044104 15791559 ~ 15795122 (+)
G371182 NA other upstream 1710409 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1785670 15047739 ~ 15054353 (+)
G372618 LOC105030512 other downstream 31003 16870434 ~ 16882185 (+)
G373726 NA other downstream 864682 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1228012 18067350 ~ 18177035 (+)
G376320 NA other downstream 3143830 19983261 ~ 19983848 (+)
G377022 NA other downstream 3752049 20591480 ~ 20596863 (+)

Expression


Co-expression Network