G372606


Basic Information

Item Value
gene id G372606
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16840489 ~ 16841034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423587
CATCTGACACACCCACCCATATACATTGTGTTCAAGTGCTGTACACTTAAAGAGCTAAAGCCAATAGCCTGAGTCACACCACAGGAATCAAACTGTTGACCTTaatccagtctgtgtgtgtttaaagcTGTGAGTGAGCCGTCTAGCTGGAAGATGAGGATAGATATTGCATTGGTGTTGAAGTTTTTACATGTTGGACTACGTGTGTGCAAGTACTGTGTACCTGCAGAATGAGTATGAAGAAGTCGACAGGTTTGCCTCTCTGGTAGATGTAGTGCAGAGCAGAGCGCTTGTCGCTGTCGTTGAACTTGATCTCCTGGATGACGTCAGGGTGCCTCAGAATCCTCAGTAATACCTTCTCAGTGACCTGACTGGGACTGAACAGACTCACCTCTGTTGGGGGGAGACACAGACCCAGAAATCACTTACAGATTGTACCATCAATTCAGACAAATCAGTCACACGAAGTAGAACTGTAGAACACATGAACAGGATGCAGTTACAGACTGTAAGACTTGTTATGAGGATGTATGACCCATTTAGGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423587 True 546 lncRNA 0.45 1 16840489 16841034

Neighbor

gene id symbol gene type direction distance location
purbb LOC106562912 coding upstream 96422 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 105360 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 114480 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 147059 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 282784 16516800 ~ 16557705 (+)
LOC110523342 LOC106569363 coding downstream 108368 16949402 ~ 16967809 (+)
st8sia5 st8sia5 coding downstream 154360 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 178553 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 278753 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 285322 17126356 ~ 17147778 (+)
G372605 NA non-coding upstream 1058 16839226 ~ 16839431 (+)
G372603 NA non-coding upstream 9589 16830649 ~ 16830900 (+)
G372602 NA non-coding upstream 10430 16829741 ~ 16830059 (+)
G372601 NA non-coding upstream 11428 16828414 ~ 16829061 (+)
G372599 NA non-coding upstream 13243 16826992 ~ 16827246 (+)
G372610 NA non-coding downstream 13195 16854229 ~ 16854450 (+)
G372612 NA non-coding downstream 14095 16855129 ~ 16855483 (+)
G372617 NA non-coding downstream 25236 16866270 ~ 16866504 (+)
G372621 LOC106569151 non-coding downstream 27636 16868670 ~ 16869064 (+)
G372664 NA non-coding downstream 117963 16958997 ~ 16982145 (+)
G372373 NA other upstream 101989 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 619556 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1045367 15791559 ~ 15795122 (+)
G371182 NA other upstream 1711672 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1786933 15047739 ~ 15054353 (+)
G372618 LOC105030512 other downstream 29400 16870434 ~ 16882185 (+)
G373726 NA other downstream 863079 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1226409 18067350 ~ 18177035 (+)
G376320 NA other downstream 3142227 19983261 ~ 19983848 (+)
G377022 NA other downstream 3750446 20591480 ~ 20596863 (+)

Expression


Co-expression Network