Gene
RNA
| Item | Value |
|---|---|
| gene id | G372617 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 16866270 ~ 16866504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423598 | True | 235 | lncRNA | 0.53 | 1 | 16866270 | 16866504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| purbb | LOC106562912 | coding | upstream | 122203 | 16741353 ~ 16744067 (+) |
| ved | LOC106569620 | coding | upstream | 131141 | 16732636 ~ 16735129 (+) |
| polm | LOC106569276 | coding | upstream | 140261 | 16712182 ~ 16726009 (+) |
| LOC110523336 | NA | coding | upstream | 172840 | 16690905 ~ 16694551 (+) |
| pargl | LOC106569224 | coding | upstream | 308565 | 16516800 ~ 16557705 (+) |
| LOC110523342 | LOC106569363 | coding | downstream | 82898 | 16949402 ~ 16967809 (+) |
| st8sia5 | st8sia5 | coding | downstream | 128890 | 16995394 ~ 17012011 (+) |
| LOC110522812 | loxhd1 | coding | downstream | 153083 | 17019587 ~ 17071539 (+) |
| atp5fa1 | LOC106569424 | coding | downstream | 253283 | 17119787 ~ 17125777 (+) |
| LOC100136246 | LOC106569430 | coding | downstream | 259852 | 17126356 ~ 17147778 (+) |
| G372612 | NA | non-coding | upstream | 10787 | 16855129 ~ 16855483 (+) |
| G372610 | NA | non-coding | upstream | 11820 | 16854229 ~ 16854450 (+) |
| G372606 | NA | non-coding | upstream | 25236 | 16840489 ~ 16841034 (+) |
| G372605 | NA | non-coding | upstream | 26839 | 16839226 ~ 16839431 (+) |
| G372603 | NA | non-coding | upstream | 35370 | 16830649 ~ 16830900 (+) |
| G372621 | LOC106569151 | non-coding | downstream | 2166 | 16868670 ~ 16869064 (+) |
| G372664 | NA | non-coding | downstream | 92493 | 16958997 ~ 16982145 (+) |
| G372676 | NA | non-coding | downstream | 120695 | 16987199 ~ 16987399 (+) |
| G372680 | NA | non-coding | downstream | 124308 | 16990812 ~ 16991929 (+) |
| G372683 | NA | non-coding | downstream | 130512 | 16997016 ~ 16998461 (+) |
| G372373 | NA | other | upstream | 127770 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 645337 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1071148 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 1737453 | 15124290 ~ 15128817 (+) |
| LOC110519479 | LOC106596183 | other | upstream | 1812714 | 15047739 ~ 15054353 (+) |
| G372618 | LOC105030512 | other | downstream | 3930 | 16870434 ~ 16882185 (+) |
| G373726 | NA | other | downstream | 837609 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 1200939 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 3116757 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3724976 | 20591480 ~ 20596863 (+) |
