XLOC_023175



Basic Information


Item Value
gene id XLOC_023175
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 39993751 ~ 39998650 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00047102
TGACGTTTGATTTCCGGTCGTTTCTTGGGCTGCCAATTTTATTCTCATTTGCTGATGTGATATTGTTTTATTACgtttttaatgttacattttcaCGTCATAAGGATACAGAAAACCTATAATGGTCAAGTTTTTTAATcgaatttttatttatacaagaaAGTAGTCAATCATCGATTACCTAAACTTTAAAATACTTGGCCAGGAGGGATCACGGGAGCTAAAATGCCTGGAAATCATTACAGTTATGAGATTATTATCTCTCACGGTTTCCACGGGCGACCCTGCAGGTGATTTATGCTCTGTTTGCAGAGAGACTCCAGAATGGGTGTGTTTGCGTAAGGAGCCCCAGTTTCCCGCTCGCGCTCAGCTCTTATTGGGATCATGAGCTCACGGATGCTGCATCCTGAATCCTGGATGTTCTCCGCCGATAAGCTTCATCCATGGATACATCCTCTCAATGGTGGATTTCAAGGGTACTCACTTCATCTAAACACTCACAATGCGGTTACCACGACAACCAGCATAAACACACTGCACACCACATACAAGAGCACGCATGAAATTATCGCACGTTTATTTTTAATGAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00047102 True 590 lncRNA 0.42 2 39993751 39998650

Neighbor


gene id symbol gene type direction distance location
XLOC_023174 BX323854.1 coding upstream 1497 39990695 ~ 39992254 (+)
XLOC_023170 NA coding upstream 8914 39893391 ~ 39984837 (+)
XLOC_023173 NA coding upstream 25574 39967951 ~ 39968177 (+)
XLOC_023172 NA coding upstream 31074 39907073 ~ 39962677 (+)
XLOC_023171 NA coding upstream 92126 39900653 ~ 39901625 (+)
XLOC_023176 scospondin coding downstream 18239 40016889 ~ 40171461 (+)
XLOC_023177 NA coding downstream 210964 40209614 ~ 40210268 (+)
XLOC_023178 KCNH2 coding downstream 474382 40473032 ~ 40500312 (+)
XLOC_023179 CU929259.1 coding downstream 530696 40529346 ~ 40639444 (+)
XLOC_023180 CU929259.2 coding downstream 649606 40648256 ~ 40648372 (+)
XLOC_023169 CT573356.2 non-coding upstream 206187 39787473 ~ 39787564 (+)
XLOC_023181 NA non-coding downstream 655451 40654101 ~ 40675875 (+)
XLOC_023182 NA non-coding downstream 710072 40708722 ~ 40805590 (+)
XLOC_023184 NA non-coding downstream 870629 40869279 ~ 40870585 (+)

Expression



Co-expression Network