G372684



Basic Information


Item Value
gene id G372684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17004384 ~ 17005069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU423698
tgttgttgttgtaaagaATGATTTGATGATAGCTGTCGCCATGGTGATGTACAATCAGCAGCAGCTCTACCTCTAGAACAGACTCCGGCACAGGCCTACATGTTCTTAAGACTGTTCCACACAGTCCTACATGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTGCGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCTACGTGTTCTTGAGGCTGTTCCACACCGTCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU423698 True 407 lncRNA 0.52 2 17004384 17005069

Neighbor


gene id symbol gene type direction distance location
LOC110523342 LOC106569363 coding upstream 36575 16949402 ~ 16967809 (+)
purbb LOC106562912 coding upstream 260317 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 269255 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 278375 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 310954 16690905 ~ 16694551 (+)
LOC110522812 loxhd1 coding downstream 14518 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 114718 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 121287 17126356 ~ 17147778 (+)
LOC110523352 LOC106569472 coding downstream 186347 17191416 ~ 17217186 (+)
LOC110523353 LOC106569485 coding downstream 230743 17235812 ~ 17242911 (+)
G372683 NA non-coding upstream 5923 16997016 ~ 16998461 (+)
G372680 NA non-coding upstream 12455 16990812 ~ 16991929 (+)
G372676 NA non-coding upstream 16985 16987199 ~ 16987399 (+)
G372664 NA non-coding upstream 22239 16958997 ~ 16982145 (+)
G372621 LOC106569151 non-coding upstream 135320 16868670 ~ 16869064 (+)
G372685 NA non-coding downstream 11331 17016400 ~ 17016603 (+)
G373068 NA non-coding downstream 30289 17035358 ~ 17037364 (+)
G373073 NA non-coding downstream 39945 17045014 ~ 17045237 (+)
G373090 NA non-coding downstream 64112 17069181 ~ 17069425 (+)
G372618 LOC105030512 other upstream 122199 16870434 ~ 16882185 (+)
G372373 NA other upstream 265884 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 783451 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1209262 15791559 ~ 15795122 (+)
G371182 NA other upstream 1875567 15124290 ~ 15128817 (+)
G373726 NA other downstream 699044 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1062374 18067350 ~ 18177035 (+)
G376320 NA other downstream 2978192 19983261 ~ 19983848 (+)
G377022 NA other downstream 3586411 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3738515 20508074 ~ 20759255 (+)

Expression



Co-expression Network